RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ATP6V1HQ9UI12 483 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 FAF1Q9UNN5 650 aaPredicted RBP9.67□□□□□ -0.86
USP1-204ENST00000452143 MAGED1Q9Y5V3 778 aaPredicted RBP9.67□□□□□ -0.86
USP1-204ENST00000452143 RNF223E7ERA6 249 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 TLX2O43763 284 aaPredicted RBP9.66□□□□□ -0.86
USP1-204ENST00000452143 EIF4E2O60573 245 aaKnown RBP9.66□□□□□ -0.86
USP1-204ENST00000452143 ADAP00813 363 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 THBS1P07996 1170 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 FGF4P08620 206 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 LINC00032P0C843 101 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 KRT4P19013 534 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 COX5AP20674 150 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 OR3A2P47893 321 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 ATP12AP54707 1039 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 BSPH1Q075Z2 132 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 TP53BP2Q13625 1128 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 CBFBQ13951 182 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 TMEM176BQ3YBM2 270 aaPredicted RBP9.66□□□□□ -0.86
USP1-204ENST00000452143 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.66□□□□□ -0.86
USP1-204ENST00000452143 ALKBH2Q6NS38 261 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 DNM1P46Q6ZS02 220 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 BHLHA15Q7RTS1 189 aaPredicted RBP9.66□□□□□ -0.86
USP1-204ENST00000452143 DDIASQ8IXT1 998 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 EIF1ADQ8N9N8 165 aaKnown RBP9.66□□□□□ -0.86
USP1-204ENST00000452143 TOR1AIP2Q8NFQ8 470 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 KBTBD8Q8NFY9 601 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 OR5W2Q8NH69 310 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 SFXN5Q8TD22 340 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 ADAMTS15Q8TE58 950 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 TWIST2Q8WVJ9 160 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 OR5P2Q8WZ92 322 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 ARL8AQ96BM9 186 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 MOAP1Q96BY2 351 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 PPP3R2Q96LZ3 170 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 PSD2Q9BQI7 771 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 REPIN1Q9BWE0 567 aaKnown RBP9.66□□□□□ -0.86
USP1-204ENST00000452143 REG4Q9BYZ8 158 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 TRIM2Q9C040 744 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 SLCO5A1Q9H2Y9 848 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 GPATCH2Q9NW75 528 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 MKS1Q9NXB0 559 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 LIPT1Q9Y234 373 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 CARD8Q9Y2G2 431 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 FIS1Q9Y3D6 152 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 DTNAQ9Y4J8 743 aa9.66□□□□□ -0.86
USP1-204ENST00000452143 ZNF814B7Z6K7 855 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 NPIPB9F8W1W9 429 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 GTPBP1O00178 669 aaKnown RBP9.65□□□□□ -0.86
USP1-204ENST00000452143 PIP5K1BO14986 540 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 ZNF264O43296 627 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 CD5LO43866 347 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 EFNA2O43921 213 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 TRIM13O60858 407 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 LYPLA1O75608 230 aaPredicted RBP9.65□□□□□ -0.86
USP1-204ENST00000452143 UBL4AP11441 157 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 EFNA1P20827 205 aaPredicted RBP9.65□□□□□ -0.86
USP1-204ENST00000452143 CDKN1AP38936 164 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 CCT3P49368 545 aaKnown RBP9.65□□□□□ -0.86
USP1-204ENST00000452143 TSC22D1Q15714 1073 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 NRF1Q16656 503 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 PGGHGQ32M88 737 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 LSM12Q3MHD2 195 aaKnown RBP9.65□□□□□ -0.86
USP1-204ENST00000452143 XKR7Q5GH72 579 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 TIMM23BQ5SRD1 257 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 BHLHB9Q6PI77 547 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 DTX2Q86UW9 622 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 P2RY8Q86VZ1 359 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 C10orf107Q8IVU9 208 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 ZNF619Q8N2I2 560 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 TMCO5AQ8N6Q1 288 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 GPR119Q8TDV5 335 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 RADILQ96JH8 1075 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 HS6ST2Q96MM7 605 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 TRAF4Q9BUZ4 470 aaPredicted RBP9.65□□□□□ -0.86
USP1-204ENST00000452143 GATA5Q9BWX5 397 aaPredicted RBP9.65□□□□□ -0.86
USP1-204ENST00000452143 NMUR2Q9GZQ4 415 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 ALG2Q9H553 416 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 CXorf36Q9H7Y0 433 aa9.65□□□□□ -0.86
USP1-204ENST00000452143 EML4Q9HC35 981 aaKnown RBP9.65□□□□□ -0.86
USP1-204ENST00000452143 ING1Q9UK53 422 aaPredicted RBP9.65□□□□□ -0.86
USP1-204ENST00000452143 GOLGA8QA0A0J9YX86 632 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 GOLGA8OA6NCC3 632 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 ZNF724A8MTY0 619 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 TMEM233B4DJY2 109 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 GOLGA8NF8WBI6 632 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 SMAD9O15198 467 aaKnown RBP9.64□□□□□ -0.87
USP1-204ENST00000452143 OIP5O43482 229 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 NPHS1O60500 1241 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 CYTIPO60759 359 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 LYZL6O75951 148 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 AK1P00568 194 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 IGHV4-39P01824 125 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 SHBGP04278 402 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 CHRNGP07510 517 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 LAMP1P11279 417 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 ENPP1P22413 925 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 ACVR1BP36896 505 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 SERPINB5P36952 375 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 RASGEF1BQ0VAM2 473 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 PTGR1Q14914 329 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms