RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	CSMD1	Q96PZ7	3565 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	CCDC168	Q8NDH2	2452 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864		A0A0J9YW62	118 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	SH3D21	A4FU49	640 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	HMGN4	O00479	90 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	ZNF195	O14628	629 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	ADAMDEC1	O15204	470 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	H6PD	O95479	791 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	KRT75	O95678	551 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	GUSB	P08236	651 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	EPX	P11678	715 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	ADH6	P28332	368 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	SLC7A1	P30825	629 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	KIR2DL2	P43627	348 aa	Predicted RBP	14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	SLC6A8	P48029	635 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	KCNJ5	P48544	419 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	FUT5	Q11128	374 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	SELENBP1	Q13228	472 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	SKP2	Q13309	424 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	C6orf10	Q5SRN2	563 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	EPGN	Q6UW88	154 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	FRRS1	Q6ZNA5	592 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	FAM214B	Q7L5A3	538 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	HMGN2P46	Q86SG4	172 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	LINC01560	Q8TB33	94 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	ARSG	Q96EG1	525 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	REXO5	Q96IC2	774 aa	Known RBP	14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	ITCH	Q96J02	903 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	MRGPRX4	Q96LA9	322 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	THUMPD3	Q9BV44	507 aa	Known RBP	14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	LAT2	Q9GZY6	243 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	VIPAS39	Q9H9C1	493 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	SLCO1B3	Q9NPD5	702 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	TIGAR	Q9NQ88	270 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	TCF7L2	Q9NQB0	619 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	INTS9	Q9NV88	658 aa	Known RBP	14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	CLEC4A	Q9UMR7	237 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	PROCR	Q9UNN8	238 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	LIPT1	Q9Y234	373 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	SLC35A3	Q9Y2D2	325 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	CSMD2	Q7Z408	3487 aa		14.17	□□□□□ -0.14
HDLBP-223	ENST00000449864	C1QC	P02747	245 aa		14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	CD8B	P10966	210 aa		14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	PGC	P20142	388 aa		14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	SHC1	P29353	583 aa		14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	POLR2J	P52435	117 aa	Known RBP	14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	CARD18	P57730	90 aa		14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	PPP2R2A	P63151	447 aa		14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	MAPK14	Q16539	360 aa		14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	ZNF239	Q16600	458 aa	Known RBP	14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	C3orf33	Q6P1S2	294 aa		14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	MSANTD1	Q6ZTZ1	278 aa		14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	OR9I1	Q8NGQ6	314 aa		14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	TMEM234	Q8WY98	164 aa		14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	OSTF1	Q92882	214 aa		14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	CPNE4	Q96A23	557 aa	Predicted RBP	14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	GMPPA	Q96IJ6	420 aa	Predicted RBP	14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	SLC39A3	Q9BRY0	314 aa		14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	RASSF1	Q9NS23	344 aa		14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	NDRG3	Q9UGV2	375 aa		14.16	□□□□□ -0.14
HDLBP-223	ENST00000449864	FAM234B	A2RU67	622 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	TGDS	O95455	350 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	PABPC4L	P0CB38	370 aa	Known RBP	14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	NR2F1	P10589	423 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	POU2F1	P14859	743 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	H2AFX	P16104	143 aa	Predicted RBP	14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	CD79B	P40259	229 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	CHRNE	Q04844	493 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	MERTK	Q12866	999 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	DAZAP2	Q15038	168 aa	Predicted RBP	14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	SYPL1	Q16563	259 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	TMEM176B	Q3YBM2	270 aa	Predicted RBP	14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	SLC25A53	Q5H9E4	307 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	COX20	Q5RI15	118 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	GTF2IRD2B	Q6EKJ0	949 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	GTF2IRD2	Q86UP8	949 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	ANKFN1	Q8N957	763 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	OR6K3	Q8NGY3	331 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	ZNF563	Q8TA94	476 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	ZFP90	Q8TF47	636 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	ST8SIA1	Q92185	356 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	NRGN	Q92686	78 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	VPS33A	Q96AX1	596 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	DACH2	Q96NX9	599 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	TRNT1	Q96Q11	434 aa	Known RBP	14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	SAP130	Q9H0E3	1048 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	QRSL1	Q9H0R6	528 aa	Known RBP	14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	SERINC1	Q9NRX5	453 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	GLRX2	Q9NS18	164 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	ELOVL5	Q9NYP7	299 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	P2RX2	Q9UBL9	471 aa		14.15	□□□□□ -0.14
HDLBP-223	ENST00000449864	PRAMEF27	A3QJZ7	478 aa		14.14	□□□□□ -0.15
HDLBP-223	ENST00000449864	CASK	O14936	926 aa		14.14	□□□□□ -0.15
HDLBP-223	ENST00000449864	EFNA2	O43921	213 aa		14.14	□□□□□ -0.15
HDLBP-223	ENST00000449864	SS18L1	O75177	396 aa	Predicted RBP	14.14	□□□□□ -0.15
HDLBP-223	ENST00000449864	GOSR1	O95249	250 aa		14.14	□□□□□ -0.15
HDLBP-223	ENST00000449864	NTN1	O95631	604 aa		14.14	□□□□□ -0.15
HDLBP-223	ENST00000449864	CHRM4	P08173	479 aa		14.14	□□□□□ -0.15
HDLBP-223	ENST00000449864	RYK	P34925	604 aa		14.14	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 70 ms