RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 VHLP40337 213 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 ARHGDIAP52565 204 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 UCNP55089 124 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 TRAM2Q15035 370 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 COL28A1Q2UY09 1125 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 WBP2NLQ6ICG8 309 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 INO80CQ6PI98 192 aaPredicted RBP17.57■□□□□ 0.4
RPS28-202ENST00000449223 GDF7Q7Z4P5 450 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 FADS6Q8N9I5 356 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 FDCSPQ8NFU4 85 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 DNAJA4Q8WW22 397 aaPredicted RBP17.57■□□□□ 0.4
RPS28-202ENST00000449223 ZNF426Q9BUY5 554 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 C12orf10Q9HB07 376 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 SACM1LQ9NTJ5 587 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 RHCGQ9UBD6 479 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 NTNG1Q9Y2I2 539 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 CNTRLQ7Z7A1 2325 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 IGF2RP11717 2491 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 PCNX3Q9H6A9 2034 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 A0A1B0GWA3 101 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 C17orf51A8MQB3 221 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 RASAL1O95294 804 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 MST1P26927 711 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 COPZ1P61923 177 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 PPP2R2BQ00005 443 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 MICAQ29983 383 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 EXOC3L2Q2M3D2 409 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 BROXQ5VW32 411 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 ULK3Q6PHR2 472 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 ZBTB49Q6ZSB9 765 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 LINC00471Q8N535 108 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 WDSUB1Q8N9V3 476 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 MDS2Q8NDY4 140 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 GPR119Q8TDV5 335 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 SNRNP27Q8WVK2 155 aaKnown RBP17.56■□□□□ 0.4
RPS28-202ENST00000449223 SH3YL1Q96HL8 342 aaPredicted RBP17.56■□□□□ 0.4
RPS28-202ENST00000449223 MPP4Q96JB8 637 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 ALPK1Q96QP1 1244 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 PRSS27Q9BQR3 290 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 KLHL4Q9C0H6 718 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 TIMMDC1Q9NPL8 285 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 CTPS2Q9NRF8 586 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 ANKRD10Q9NXR5 420 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 USE1Q9NZ43 259 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 PPP4R1LQ9P1A2 415 aa17.56■□□□□ 0.4
RPS28-202ENST00000449223 ANKRD11Q6UB99 2663 aaPredicted RBP17.55■□□□□ 0.4
RPS28-202ENST00000449223 TRBV4-1A0A0J9YWV2 114 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 OR5H15A6NDH6 313 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 H0YJX3 145 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 SOCS2O14508 198 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 TRIM3O75382 744 aaPredicted RBP17.55■□□□□ 0.4
RPS28-202ENST00000449223 P04436 131 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 RYKP34925 604 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 SLC1A3P43003 542 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 ST13P50502 369 aaKnown RBP17.55■□□□□ 0.4
RPS28-202ENST00000449223 CCL11P51671 97 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 OC90Q02509 493 aaPredicted RBP17.55■□□□□ 0.4
RPS28-202ENST00000449223 PPP1R8Q12972 351 aaKnown RBP17.55■□□□□ 0.4
RPS28-202ENST00000449223 DCST1Q5T197 706 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 PRAMEF20Q5VT98 475 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 LINC00114Q6XXX2 140 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 LINC00696Q6ZRV3 163 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 TMCO5AQ8N6Q1 288 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 OR52J3Q8NH60 311 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 SLC38A4Q969I6 547 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 SDCCAG3Q96C92 435 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 SMAD5Q99717 465 aaKnown RBP17.55■□□□□ 0.4
RPS28-202ENST00000449223 ADAM19Q9H013 955 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 COQ10BQ9H8M1 238 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 SLC7A7Q9UM01 511 aa17.55■□□□□ 0.4
RPS28-202ENST00000449223 PCDHGA9Q9Y5G4 932 aaKnown RBP17.55■□□□□ 0.4
RPS28-202ENST00000449223 A0A087WV48 116 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 SH3PXD2BA1X283 911 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 A6NL46 340 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 PDLIM1O00151 329 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 SNPHO15079 494 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 HPRP00739 348 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 IDH2P48735 452 aaKnown RBP17.54■□□□□ 0.4
RPS28-202ENST00000449223 CCR4P51679 360 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 OR1C1Q15619 314 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 LRRC36Q1X8D7 754 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 ALG10BQ5I7T1 473 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 ZNF770Q6IQ21 691 aaPredicted RBP17.54■□□□□ 0.4
RPS28-202ENST00000449223 FAHD1Q6P587 224 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 TBPL2Q6SJ96 375 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 STK32CQ86UX6 486 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 PACS2Q86VP3 889 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 PLCZ1Q86YW0 608 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 CBR4Q8N4T8 237 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 ST8SIA1Q92185 356 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 C3orf49Q96BT1 292 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 SIGLEC12Q96PQ1 595 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 SLC29A1Q99808 456 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 KLHDC3Q9BQ90 382 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 HRH3Q9Y5N1 445 aa17.54■□□□□ 0.4
RPS28-202ENST00000449223 A0A087WUU8 490 aa17.53■□□□□ 0.4
RPS28-202ENST00000449223 CDC40O60508 579 aaKnown RBP eCLIP17.53■□□□□ 0.4
RPS28-202ENST00000449223 SLC25A12O75746 678 aa17.53■□□□□ 0.4
RPS28-202ENST00000449223 ALPLP05186 524 aa17.53■□□□□ 0.4
RPS28-202ENST00000449223 RBM34P42696 430 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms