RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 TMEM44Q2T9K0 475 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 VWA2Q5GFL6 755 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 CASP12Q6UXS9 341 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 Q6ZPB1 254 aaPredicted RBP6.36□□□□□ -1.39
RFC4-209ENST00000448497 PTCHD4Q6ZW05 846 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 HMGN2P46Q86SG4 172 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 PPP1R3BQ86XI6 285 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 KIF18BQ86Y91 864 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 ERI1Q8IV48 349 aaKnown RBP6.36□□□□□ -1.39
RFC4-209ENST00000448497 METTL27Q8N6F8 245 aaPredicted RBP6.36□□□□□ -1.39
RFC4-209ENST00000448497 ZNF527Q8NB42 609 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 AGBL5Q8NDL9 886 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 OR4N2Q8NGD1 307 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 C9orf43Q8TAL5 461 aaPredicted RBP6.36□□□□□ -1.39
RFC4-209ENST00000448497 STT3BQ8TCJ2 826 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 RAB2BQ8WUD1 216 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 ZFAND2BQ8WV99 257 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 DNAJA4Q8WW22 397 aaPredicted RBP6.36□□□□□ -1.39
RFC4-209ENST00000448497 TMEM239Q8WW34 195 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 CNOT9Q92600 299 aaKnown RBP6.36□□□□□ -1.39
RFC4-209ENST00000448497 TSLPQ969D9 159 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 UBE2FQ969M7 185 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 ISOC1Q96CN7 298 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 OR6C1Q96RD1 312 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 TSC22D3Q99576 134 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 GPA33Q99795 319 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 SLC19A3Q9BZV2 496 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 NXF5Q9H1B4 397 aaKnown RBP6.36□□□□□ -1.39
RFC4-209ENST00000448497 WDR54Q9H977 334 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 GPN2Q9H9Y4 310 aaPredicted RBP6.36□□□□□ -1.39
RFC4-209ENST00000448497 C12orf10Q9HB07 376 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 SRA1Q9HD15 236 aaKnown RBP6.36□□□□□ -1.39
RFC4-209ENST00000448497 FSCN3Q9NQT6 498 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 FBXO8Q9NRD0 319 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 PNO1Q9NRX1 252 aaKnown RBP6.36□□□□□ -1.39
RFC4-209ENST00000448497 RASSF1Q9NS23 344 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 MRPS18AQ9NVS2 196 aaKnown RBP6.36□□□□□ -1.39
RFC4-209ENST00000448497 ERVK-18Q9QC07 812 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 COPS7AQ9UBW8 275 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 NXT1Q9UKK6 140 aaKnown RBP6.36□□□□□ -1.39
RFC4-209ENST00000448497 SLC7A7Q9UM01 511 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 OR10H1Q9Y4A9 318 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 CDH10Q9Y6N8 788 aa6.36□□□□□ -1.39
RFC4-209ENST00000448497 A0A1B0GWA3 101 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 A0A1W2PQ72 361 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 IRGMA1A4Y4 181 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 OR2W5A6NFC9 320 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 ZNF99A8MXY4 864 aaPredicted RBP6.35□□□□□ -1.39
RFC4-209ENST00000448497 IDSB3KWA1 339 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 B4E171 279 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 H3BN98 237 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 TMX2-CTNND1H3BSU7 103 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 AHCYL1O43865 530 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 TSPAN2O60636 221 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 BCAS1O75363 584 aaPredicted RBP6.35□□□□□ -1.39
RFC4-209ENST00000448497 TRMUO75648 421 aaKnown RBP6.35□□□□□ -1.39
RFC4-209ENST00000448497 SCRG1O75711 98 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 CSTAP01040 98 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 MT-ND2P03891 347 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 HMGN1P05114 100 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 CD63P08962 238 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 PRG2P13727 222 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 NAGAP17050 411 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 SLC5A2P31639 672 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 CSTF2P33240 577 aaKnown RBP eCLIP6.35□□□□□ -1.39
RFC4-209ENST00000448497 TSPAN7P41732 249 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 MASP1P48740 699 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 PCYT1AP49585 367 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 PNLIPRP2P54317 469 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 LSAMPQ13449 338 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 GINS1Q14691 196 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 NCF4Q15080 339 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 NEDD8Q15843 81 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 MINDY4Q4G0A6 757 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 MFSD4BQ5TF39 518 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 PRAMEF17Q5VTA0 474 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 PWWP2BQ6NUJ5 590 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 SLC27A4Q6P1M0 643 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 ULK3Q6PHR2 472 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 TMEM205Q6UW68 189 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 ZNF517Q6ZMY9 492 aaPredicted RBP6.35□□□□□ -1.39
RFC4-209ENST00000448497 ZNF620Q6ZNG0 422 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 SLC29A4Q7RTT9 530 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 ANKRD37Q7Z713 158 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 SLCO6A1Q86UG4 719 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 ANKRD13BQ86YJ7 626 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 WFDC8Q8IUA0 241 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 NRMQ8IXM6 262 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 C9orf40Q8IXQ3 194 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 SLC34A3Q8N130 599 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 GALNT15Q8N3T1 639 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 SLC38A9Q8NBW4 561 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 NFAM1Q8NET5 270 aaPredicted RBP6.35□□□□□ -1.39
RFC4-209ENST00000448497 B3GNT7Q8NFL0 401 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 OR4C3Q8NH37 302 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 NUBPLQ8TB37 319 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 TEX47Q8TBZ9 253 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 TMEM163Q8TC26 289 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 DOK4Q8TEW6 326 aa6.35□□□□□ -1.39
RFC4-209ENST00000448497 TMEM255BQ8WV15 326 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms