RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 BHLHE41Q9C0J9 482 aaPredicted RBP25.15■■□□□ 1.62
CBX4-202ENST00000448310 SERHL2Q9H4I8 314 aa25.15■■□□□ 1.62
CBX4-202ENST00000448310 CXorf56Q9H5V9 222 aa25.15■■□□□ 1.62
CBX4-202ENST00000448310 ZNF701Q9NV72 531 aaPredicted RBP25.15■■□□□ 1.62
CBX4-202ENST00000448310 PRKD3O94806 890 aa25.14■■□□□ 1.62
CBX4-202ENST00000448310 NUDT17P0C025 328 aa25.14■■□□□ 1.62
CBX4-202ENST00000448310 G6PDP11413 515 aa25.14■■□□□ 1.62
CBX4-202ENST00000448310 PAX1P15863 534 aa25.14■■□□□ 1.62
CBX4-202ENST00000448310 PRPS1L1P21108 318 aa25.14■■□□□ 1.62
CBX4-202ENST00000448310 IL32P24001 234 aa25.14■■□□□ 1.62
CBX4-202ENST00000448310 IFFO1Q0D2I5 559 aa25.14■■□□□ 1.62
CBX4-202ENST00000448310 PDZK1Q5T2W1 519 aa25.14■■□□□ 1.62
CBX4-202ENST00000448310 MRGPRX4Q96LA9 322 aa25.14■■□□□ 1.62
CBX4-202ENST00000448310 SDF2Q99470 211 aa25.14■■□□□ 1.62
CBX4-202ENST00000448310 L2HGDHQ9H9P8 463 aa25.14■■□□□ 1.62
CBX4-202ENST00000448310 CADP27708 2225 aa25.14■■□□□ 1.61
CBX4-202ENST00000448310 ZNF264O43296 627 aa25.13■■□□□ 1.61
CBX4-202ENST00000448310 ADAP00813 363 aa25.13■■□□□ 1.61
CBX4-202ENST00000448310 UBL4AP11441 157 aa25.13■■□□□ 1.61
CBX4-202ENST00000448310 SERPINB5P36952 375 aa25.13■■□□□ 1.61
CBX4-202ENST00000448310 ATP5J2P56134 94 aa25.13■■□□□ 1.61
CBX4-202ENST00000448310 SELENBP1Q13228 472 aa25.13■■□□□ 1.61
CBX4-202ENST00000448310 QPRTQ15274 297 aa25.13■■□□□ 1.61
CBX4-202ENST00000448310 TAB1Q15750 504 aa25.13■■□□□ 1.61
CBX4-202ENST00000448310 PGS1Q32NB8 556 aa25.13■■□□□ 1.61
CBX4-202ENST00000448310 SFRP5Q5T4F7 317 aa25.13■■□□□ 1.61
CBX4-202ENST00000448310 ATG4DQ86TL0 474 aaPredicted RBP25.13■■□□□ 1.61
CBX4-202ENST00000448310 CLECL1Q8IZS7 167 aa25.13■■□□□ 1.61
CBX4-202ENST00000448310 OR5W2Q8NH69 310 aa25.13■■□□□ 1.61
CBX4-202ENST00000448310 MOAP1Q96BY2 351 aa25.13■■□□□ 1.61
CBX4-202ENST00000448310 HDHD5Q9BXW7 423 aa25.13■■□□□ 1.61
CBX4-202ENST00000448310 LAMP3Q9UQV4 416 aa25.13■■□□□ 1.61
CBX4-202ENST00000448310 ESPNB1AK53 854 aa25.12■■□□□ 1.61
CBX4-202ENST00000448310 CLOCKO15516 846 aa25.12■■□□□ 1.61
CBX4-202ENST00000448310 BPGMP07738 259 aa25.12■■□□□ 1.61
CBX4-202ENST00000448310 YES1P07947 543 aa25.12■■□□□ 1.61
CBX4-202ENST00000448310 SLC7A1P30825 629 aa25.12■■□□□ 1.61
CBX4-202ENST00000448310 GPR68Q15743 365 aa25.12■■□□□ 1.61
CBX4-202ENST00000448310 TOR1AIP2Q8NFQ8 470 aa25.12■■□□□ 1.61
CBX4-202ENST00000448310 LILRB1Q8NHL6 650 aaPredicted RBP25.12■■□□□ 1.61
CBX4-202ENST00000448310 QRSL1Q9H0R6 528 aaKnown RBP25.12■■□□□ 1.61
CBX4-202ENST00000448310 KCNE5Q9UJ90 142 aa25.12■■□□□ 1.61
CBX4-202ENST00000448310 ING1Q9UK53 422 aaPredicted RBP25.12■■□□□ 1.61
CBX4-202ENST00000448310 RNF115Q9Y4L5 304 aa25.12■■□□□ 1.61
CBX4-202ENST00000448310 CENPVL1A0A0U1RR11 272 aa25.11■■□□□ 1.61
CBX4-202ENST00000448310 ZNF814B7Z6K7 855 aa25.11■■□□□ 1.61
CBX4-202ENST00000448310 EIF4E2O60573 245 aaKnown RBP25.11■■□□□ 1.61
CBX4-202ENST00000448310 CYP7B1O75881 506 aa25.11■■□□□ 1.61
CBX4-202ENST00000448310 SOX30O94993 753 aa25.11■■□□□ 1.61
CBX4-202ENST00000448310 MATN1P21941 496 aa25.11■■□□□ 1.61
CBX4-202ENST00000448310 VSNL1P62760 191 aa25.11■■□□□ 1.61
CBX4-202ENST00000448310 CBFBQ13951 182 aa25.11■■□□□ 1.61
CBX4-202ENST00000448310 CAPRIN1Q14444 709 aaKnown RBP25.11■■□□□ 1.61
CBX4-202ENST00000448310 SLC25A53Q5H9E4 307 aa25.11■■□□□ 1.61
CBX4-202ENST00000448310 OR4F3Q6IEY1 312 aa25.11■■□□□ 1.61
CBX4-202ENST00000448310 PRIMA1Q86XR5 153 aa25.11■■□□□ 1.61
CBX4-202ENST00000448310 NEUROG1Q92886 237 aa25.11■■□□□ 1.61
CBX4-202ENST00000448310 KISS1RQ969F8 398 aaPredicted RBP25.11■■□□□ 1.61
CBX4-202ENST00000448310 PPP1R36Q96LQ0 422 aa25.11■■□□□ 1.61
CBX4-202ENST00000448310 GP6Q9HCN6 339 aa25.11■■□□□ 1.61
CBX4-202ENST00000448310 SERINC4A6NH21 518 aa25.1■■□□□ 1.61
CBX4-202ENST00000448310 C9JVG2 144 aa25.1■■□□□ 1.61
CBX4-202ENST00000448310 INAFM1C9JVW0 142 aa25.1■■□□□ 1.61
CBX4-202ENST00000448310 FCMRO60667 390 aa25.1■■□□□ 1.61
CBX4-202ENST00000448310 H6PDO95479 791 aa25.1■■□□□ 1.61
CBX4-202ENST00000448310 CASP9P55211 416 aa25.1■■□□□ 1.61
CBX4-202ENST00000448310 NCMAPQ5T1S8 102 aa25.1■■□□□ 1.61
CBX4-202ENST00000448310 ZC3HAV1Q7Z2W4 902 aaKnown RBP25.1■■□□□ 1.61
CBX4-202ENST00000448310 C6orf120Q7Z4R8 191 aa25.1■■□□□ 1.61
CBX4-202ENST00000448310 SLC43A2Q8N370 569 aa25.1■■□□□ 1.61
CBX4-202ENST00000448310 ZNF775Q96BV0 537 aaPredicted RBP25.1■■□□□ 1.61
CBX4-202ENST00000448310 TRIM44Q96DX7 344 aaPredicted RBP25.1■■□□□ 1.61
CBX4-202ENST00000448310 PKNOX2Q96KN3 472 aa25.1■■□□□ 1.61
CBX4-202ENST00000448310 OR5B2Q96R09 309 aa25.1■■□□□ 1.61
CBX4-202ENST00000448310 PSD2Q9BQI7 771 aa25.1■■□□□ 1.61
CBX4-202ENST00000448310 THUMPD3Q9BV44 507 aaKnown RBP25.1■■□□□ 1.61
CBX4-202ENST00000448310 PRSS50Q9UI38 385 aa25.1■■□□□ 1.61
CBX4-202ENST00000448310 RNF103-CHMP3A0A140T963 221 aa25.09■■□□□ 1.61
CBX4-202ENST00000448310 CD3EP07766 207 aa25.09■■□□□ 1.61
CBX4-202ENST00000448310 EDNRAP25101 427 aa25.09■■□□□ 1.61
CBX4-202ENST00000448310 CLDN8P56748 225 aa25.09■■□□□ 1.61
CBX4-202ENST00000448310 RAC3P60763 192 aa25.09■■□□□ 1.61
CBX4-202ENST00000448310 RPS4XP62701 263 aaKnown RBP25.09■■□□□ 1.61
CBX4-202ENST00000448310 EMX2Q04743 252 aa25.09■■□□□ 1.61
CBX4-202ENST00000448310 SKP2Q13309 424 aa25.09■■□□□ 1.61
CBX4-202ENST00000448310 PDCD2Q16342 344 aaPredicted RBP25.09■■□□□ 1.61
CBX4-202ENST00000448310 TIGD2Q4W5G0 525 aa25.09■■□□□ 1.61
CBX4-202ENST00000448310 BHLHB9Q6PI77 547 aa25.09■■□□□ 1.61
CBX4-202ENST00000448310 SLC35G5Q96KT7 338 aa25.09■■□□□ 1.61
CBX4-202ENST00000448310 ZNF300Q96RE9 604 aaPredicted RBP25.09■■□□□ 1.61
CBX4-202ENST00000448310 NMUR2Q9GZQ4 415 aa25.09■■□□□ 1.61
CBX4-202ENST00000448310 BCO1Q9HAY6 547 aa25.09■■□□□ 1.61
CBX4-202ENST00000448310 KLHL9Q9P2J3 617 aa25.09■■□□□ 1.61
CBX4-202ENST00000448310 MKLN1Q9UL63 735 aa25.09■■□□□ 1.61
CBX4-202ENST00000448310 SMAD9O15198 467 aaKnown RBP25.08■■□□□ 1.61
CBX4-202ENST00000448310 ITM2AO43736 263 aa25.08■■□□□ 1.61
CBX4-202ENST00000448310 SOD3P08294 240 aa25.08■■□□□ 1.61
CBX4-202ENST00000448310 ETV4P43268 484 aa25.08■■□□□ 1.61
CBX4-202ENST00000448310 C21orf58P58505 322 aa25.08■■□□□ 1.61
CBX4-202ENST00000448310 ITGADQ13349 1161 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms