RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 KCTD12Q96CX2 325 aaKnown RBP8.46□□□□□ -1.06
NIPBL-202ENST00000448238 MRPL13Q9BYD1 178 aaKnown RBP8.46□□□□□ -1.06
NIPBL-202ENST00000448238 SLC7A7Q9UM01 511 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 INO80Q9ULG1 1556 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 OVOS2A0A0J9YW53 1432 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 OVOS2Q6IE36 1432 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 HIDE1A8MVS5 230 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 CRXO43186 299 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 HPGDSO60760 199 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 ARRB1P49407 418 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 HERVK_113P61574 105 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 DGKZQ13574 1117 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 RAB6CQ53S08 254 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 MAP1SQ66K74 1059 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 KIAA0319LQ8IZA0 1049 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 FAM131CQ96AQ9 280 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 GLOD5A6NK44 160 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF44P15621 663 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 RPS5P46782 204 aaKnown RBP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 MARCKSL1P49006 195 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 LGALS4P56470 323 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 Q3ZCU0 254 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 OR5P2Q8WZ92 322 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 DIO2Q92813 273 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 FOXN4Q96NZ1 517 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 C11orf68Q9H3H3 251 aaKnown RBP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 SIRPGQ9P1W8 387 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 M0QZ24 198 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 MAN2B1O00754 1011 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 JTBO76095 146 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 EBLN1P0CF75 366 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 CD1CP29017 333 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 OR5I1Q13606 314 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 RAB33AQ14088 237 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 TATDN3Q17R31 274 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 MICAQ29983 383 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 TMUB2Q71RG4 321 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 FBXO22Q8NEZ5 403 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 AKR7LQ8NHP1 331 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 TSGA13Q96PP4 275 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 SYNPO2LQ9H987 977 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 GNB4Q9HAV0 340 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 FBXW11Q9UKB1 542 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF281Q9Y2X9 895 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 MAFBQ9Y5Q3 323 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 C9JVG2 144 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 E5RGE8 158 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 ARPC1BO15143 372 aaKnown RBP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 HTRA2O43464 458 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 ICMTO60725 284 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 CBX7O95931 251 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 HOXB5P09067 269 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 ARP10275 920 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 TAS2R60P59551 318 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 PDZK1IP1Q13113 114 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 GPR19Q15760 415 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 HBMQ6B0K9 141 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 SIDT2Q8NBJ9 832 aaKnown RBP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 CYP2W1Q8TAV3 490 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 WDR20Q8TBZ3 569 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 DTD1Q8TEA8 209 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 RAB8BQ92930 207 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 SENP5Q96HI0 755 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 C12orf57Q99622 126 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 INPP5EQ9NRR6 644 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 YKT6O15498 198 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 BANF1O75531 89 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 CNIH1O95406 144 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 M6PRP20645 277 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 NPY1RP25929 384 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 BTNL3Q6UXE8 466 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 OR5H6Q8NGV6 325 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 SYNPRQ8TBG9 265 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 PXYLP1Q8TE99 480 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 PRAP1Q96NZ9 151 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 NOX3Q9HBY0 568 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 TMEM82A0PJX8 343 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 ALPIP09923 528 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 ATP4BP51164 291 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 NKX2-5P52952 324 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 ATP1B3P54709 279 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 CAP1Q01518 475 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 APOFQ13790 326 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 OR52E2Q8NGJ4 325 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 EXTL1Q92935 676 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 NUDT22Q9BRQ3 303 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 TRPM6Q9BX84 2022 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 IKZF5Q9H5V7 419 aa8.45□□□□□ -1.06
NIPBL-202ENST00000448238 GBA2Q9HCG7 927 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 INTS6Q9UL03 887 aaKnown RBP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 TP53BP1Q12888 1972 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-202ENST00000448238 C4orf47A7E2U8 309 aa8.44□□□□□ -1.06
NIPBL-202ENST00000448238 GRXCR1A8MXD5 290 aa8.44□□□□□ -1.06
NIPBL-202ENST00000448238 RELAQ04206 551 aa8.44□□□□□ -1.06
NIPBL-202ENST00000448238 LRIT3Q3SXY7 679 aa8.44□□□□□ -1.06
NIPBL-202ENST00000448238 FRMPD2BQ6IN97 320 aa8.44□□□□□ -1.06
NIPBL-202ENST00000448238 RNF111Q6ZNA4 994 aa8.44□□□□□ -1.06
NIPBL-202ENST00000448238 FRMD1Q8N878 549 aa8.44□□□□□ -1.06
NIPBL-202ENST00000448238 C2orf15Q8WU43 125 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms