RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 TIGD4Q8IY51 512 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 ZNF680Q8NEM1 530 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 OR4K14Q8NGD5 310 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 COL26A1Q96A83 441 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 ARMC5Q96C12 935 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 IFT27Q9BW83 186 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 MFRPQ9BY79 579 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 ZDHHC4Q9NPG8 344 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 PLEKHM1Q9Y4G2 1056 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 J3QLW9 94 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 TSC22D2O75157 780 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 CEACAM5P06731 702 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 SAGP10523 405 aaPredicted RBP17.68■□□□□ 0.42
SDCBP-204ENST00000447182 NID1P14543 1247 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 ZNF19P17023 458 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 POU3F3P20264 500 aaPredicted RBP17.68■□□□□ 0.42
SDCBP-204ENST00000447182 NDUFS1P28331 727 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 OR12D2P58182 307 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 ACTC1P68032 377 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 ACTA1P68133 377 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 COL28A1Q2UY09 1125 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 EXOSC6Q5RKV6 272 aaKnown RBP17.68■□□□□ 0.42
SDCBP-204ENST00000447182 MRPL2Q5T653 305 aaKnown RBP17.68■□□□□ 0.42
SDCBP-204ENST00000447182 SIAH3Q8IW03 269 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 CDK20Q8IZL9 346 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 OR11H4Q8NGC9 324 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 BPIFA2Q96DR5 249 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 DHRS9Q9BPW9 319 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 CACNG6Q9BXT2 260 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 OR51V1Q9H2C8 321 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 HEXA-AS1Q9H8Q6 139 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 KLHL1Q9NR64 748 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 KCMF1Q9P0J7 381 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 SLC17A4Q9Y2C5 497 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 INSL6Q9Y581 213 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 TBC1D3EA0A087X179 549 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 A0A1B0GVI7 797 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 CDHR4A6H8M9 788 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 RIIAD1A6NNX1 92 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 MID1O15344 667 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 GKN3PP0CG01 181 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 GIFP27352 417 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 BMP8BP34820 402 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 RPS15AP62244 130 aaKnown RBP17.67■□□□□ 0.42
SDCBP-204ENST00000447182 RGS1Q08116 209 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 FGL2Q14314 439 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 BAIAP2L2Q6UXY1 529 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 BMP8AQ7Z5Y6 402 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 LUZP2Q86TE4 346 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 CDH24Q86UP0 819 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 PAQR7Q86WK9 346 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 BMPERQ8N8U9 685 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 NT5CQ8TCD5 201 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 SPPL3Q8TCT6 385 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 SMPDL3BQ92485 455 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 GHSRQ92847 366 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 KIR3DX1Q9H7L2 352 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 PRDM9Q9NQV7 894 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 EIF3KQ9UBQ5 218 aaKnown RBP17.67■□□□□ 0.42
SDCBP-204ENST00000447182 ST6GALNAC2Q9UJ37 374 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 SATB2Q9UPW6 733 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 BAIAP2Q9UQB8 552 aa17.67■□□□□ 0.42
SDCBP-204ENST00000447182 GSTZ1O43708 216 aaPredicted RBP17.66■□□□□ 0.42
SDCBP-204ENST00000447182 PTP4A3O75365 173 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 STX11O75558 287 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 PAK4O96013 591 aaPredicted RBP17.66■□□□□ 0.42
SDCBP-204ENST00000447182 SERPINA3P01011 423 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 MRPL3P09001 348 aaKnown RBP17.66■□□□□ 0.42
SDCBP-204ENST00000447182 POU2F2P09086 479 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 CD3GP09693 182 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 ZNF888P0CJ79 500 aaPredicted RBP17.66■□□□□ 0.42
SDCBP-204ENST00000447182 CXCL3P19876 107 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 NOS3P29474 1203 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 ACVR1BP36896 505 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 POU4F2Q12837 409 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 GSG1Q2KHT4 349 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 USP53Q70EK8 1073 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 OR13C2Q8NGS9 318 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 SORCS2Q96PQ0 1159 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 C19orf53Q9UNZ5 99 aaPredicted RBP17.66■□□□□ 0.42
SDCBP-204ENST00000447182 CTDSPLO15194 276 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 LAMP2P13473 410 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 UGT2B7P16662 529 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 ZNF3P17036 446 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 SLC16A1P53985 500 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 DGCR2P98153 550 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 DYRK1AQ13627 763 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 AMZ1Q400G9 498 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 RPTNQ6XPR3 784 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 BTN2A1Q7KYR7 527 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 FGD2Q7Z6J4 655 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 OR5J2Q8NH18 312 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 OR4C6Q8NH72 309 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 ACTR6Q9GZN1 396 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 TMEM168Q9H0V1 697 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 UCKL1Q9NWZ5 548 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 CAMK2AQ9UQM7 478 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 MED31Q9Y3C7 131 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 SCN3AQ9NY46 2000 aa17.66■□□□□ 0.42
SDCBP-204ENST00000447182 MEIKINA0A087WXM9 373 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms