RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 DPTQ07507 201 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 CRMP1Q14194 572 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 ELAVL3Q14576 367 aaKnown RBP13.19□□□□□ -0.3
ERCC3-203ENST00000445889 DECR1Q16698 335 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF527Q8NB42 609 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 OR56A1Q8NGH5 318 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 ZMYND19Q96E35 227 aaPredicted RBP13.19□□□□□ -0.3
ERCC3-203ENST00000445889 GPR174Q9BXC1 333 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 TRIM36Q9NQ86 728 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 PRUNE2Q8WUY3 3088 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 A0A0G2JK05 382 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 UNC119BA6NIH7 251 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 J3QRE1 110 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 NPR2P20594 1047 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 RBMS1P29558 406 aaKnown RBP13.19□□□□□ -0.3
ERCC3-203ENST00000445889 PSMB10P40306 273 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 GNA13Q14344 377 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 GXYLT1Q4G148 440 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 DEFB134Q4QY38 66 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 CHMP1BQ7LBR1 199 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 KANSL1Q7Z3B3 1105 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 KISS1RQ969F8 398 aaPredicted RBP13.19□□□□□ -0.3
ERCC3-203ENST00000445889 COX14Q96I36 57 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 CD180Q99467 661 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 PDCD1LG2Q9BQ51 273 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 PRSS27Q9BQR3 290 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 CLEC4MQ9H2X3 399 aaPredicted RBP13.19□□□□□ -0.3
ERCC3-203ENST00000445889 FN3KQ9H479 309 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 PHF11Q9UIL8 331 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 MRPS23Q9Y3D9 190 aaKnown RBP13.19□□□□□ -0.3
ERCC3-203ENST00000445889 NUP210Q8TEM1 1887 aaPredicted RBP13.19□□□□□ -0.3
ERCC3-203ENST00000445889 LRRN3E7EW58 273 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 KLF4O43474 513 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 GMDSO60547 372 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 PPP1R3DO95685 299 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 TPOP07202 933 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 SELENOPP49908 381 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 RAB28P51157 221 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 FOXK2Q01167 660 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 ARHGAP19Q14CB8 494 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 TMEM255AQ5JRV8 349 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 GET4Q7L5D6 327 aaPredicted RBP13.19□□□□□ -0.3
ERCC3-203ENST00000445889 ANKRD33Q7Z3H0 272 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 OR2T35Q8NGX2 323 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 YIPF5Q969M3 257 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF681Q96N22 645 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 DERL3Q96Q80 235 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 UBL7Q96S82 380 aaPredicted RBP13.19□□□□□ -0.3
ERCC3-203ENST00000445889 ACTRT3Q9BYD9 372 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 RBCK1Q9BYM8 510 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 LRRN3Q9H3W5 708 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 MARK1Q9P0L2 795 aa13.19□□□□□ -0.3
ERCC3-203ENST00000445889 CXorf51AA0A1B0GTR3 108 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 C7orf66A4D0T2 115 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 IDSB3KWA1 339 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 PRR23D1E9PI22 279 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-203ENST00000445889 GPR171O14626 319 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 MID1O15344 667 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 LDB3O75112 727 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 GATBO75879 557 aaKnown RBP13.18□□□□□ -0.3
ERCC3-203ENST00000445889 RPN2P04844 631 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 PRR23D2P0DMB1 279 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-203ENST00000445889 GRPRP30550 384 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF136P52737 540 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 ACSM1Q08AH1 577 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 SRSF5Q13243 272 aaKnown RBP13.18□□□□□ -0.3
ERCC3-203ENST00000445889 SUZ12Q15022 739 aaKnown RBP13.18□□□□□ -0.3
ERCC3-203ENST00000445889 RD3Q7Z3Z2 195 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 OR2L5Q8NG80 312 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 OR52L1Q8NGH7 329 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 NDC1Q9BTX1 674 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 OR10A4Q9H209 315 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 METTL17Q9H7H0 456 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-203ENST00000445889 CLDND1Q9NY35 253 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 DEC1Q9P2X7 70 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 KCNE5Q9UJ90 142 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 TRIOO75962 3097 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 LINC00862A6NCI5 91 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 FAM171A2A8MVW0 826 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 HMGN1P05114 100 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF888P0CJ79 500 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-203ENST00000445889 UBL4AP11441 157 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 PEBP1P30086 187 aaKnown RBP13.18□□□□□ -0.3
ERCC3-203ENST00000445889 ANXA11P50995 505 aaKnown RBP13.18□□□□□ -0.3
ERCC3-203ENST00000445889 ZNF85Q03923 595 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 SNTB2Q13425 540 aaKnown RBP13.18□□□□□ -0.3
ERCC3-203ENST00000445889 CAMK2DQ13557 499 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 GALEQ14376 348 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 MRPL2Q5T653 305 aaKnown RBP13.18□□□□□ -0.3
ERCC3-203ENST00000445889 PYHIN1Q6K0P9 492 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 BPHLQ86WA6 291 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-203ENST00000445889 SMPDL3BQ92485 455 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 PTCHD1Q96NR3 888 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 TRAF4Q9BUZ4 470 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-203ENST00000445889 FKRPQ9H9S5 495 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 EMC7Q9NPA0 242 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 ADAM29Q9UKF5 820 aa13.18□□□□□ -0.3
ERCC3-203ENST00000445889 BHLHE40O14503 412 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 MT-ND5P03915 603 aa13.17□□□□□ -0.3
ERCC3-203ENST00000445889 H2AFB2P0C5Z0 115 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms