RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 SLC5A6Q9Y289 635 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 SH3GLB1Q9Y371 365 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 CHST2Q9Y4C5 530 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 B4DXG7 233 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 M0R3H8 397 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 ACOT8O14734 319 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 RRP9O43818 475 aaKnown RBP15.65■□□□□ 0.1
LIME1-202ENST00000444951 PRKD3O94806 890 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 EPPINO95925 133 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 FESP07332 822 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 RFPL3SP0C7P2 107 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 PRG2P13727 222 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 ENDOUP21128 410 aaKnown RBP15.65■□□□□ 0.1
LIME1-202ENST00000444951 GDF1P27539 372 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 ADH7P40394 386 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 OR1E2P47887 323 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 SELENOWP63302 87 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 FOXO1Q12778 655 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 TRAP1Q12931 704 aaKnown RBP15.65■□□□□ 0.1
LIME1-202ENST00000444951 C1orf146Q5VVC0 180 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 ENPP6Q6UWR7 440 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 CBLL1Q75N03 491 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 FAM86B1Q8N7N1 296 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 ST6GALNAC3Q8NDV1 305 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 OR2M3Q8NG83 312 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 RAB3IPQ96QF0 476 aaPredicted RBP15.65■□□□□ 0.1
LIME1-202ENST00000444951 TTTY12Q9BZ98 90 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 TRIM15Q9C019 465 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 LAT2Q9GZY6 243 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 DCAF13Q9NV06 445 aaKnown RBP15.65■□□□□ 0.1
LIME1-202ENST00000444951 PCDHGB6Q9Y5F9 930 aa15.65■□□□□ 0.1
LIME1-202ENST00000444951 CREBBPQ92793 2442 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 LRBAP50851 2863 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 AP3D1O14617 1153 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 EIF4E2O60573 245 aaKnown RBP15.64■□□□□ 0.09
LIME1-202ENST00000444951 TRAPPC6AO75865 159 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 NQO1P15559 274 aaKnown RBP15.64■□□□□ 0.09
LIME1-202ENST00000444951 P2RX1P51575 399 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 RGS8P57771 180 aaPredicted RBP15.64■□□□□ 0.09
LIME1-202ENST00000444951 PPIAP62937 165 aaKnown RBP15.64■□□□□ 0.09
LIME1-202ENST00000444951 LCN8Q6JVE9 175 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 SPATA24Q86W54 205 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 LACC1Q8IV20 430 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 TOR1AIP2Q8NFQ8 470 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 NTNG2Q96CW9 530 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 RNF145Q96MT1 663 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 FRMD6Q96NE9 622 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 SEPHS2Q99611 448 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 WFDC6Q9BQY6 131 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 PRR14Q9BWN1 585 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 TSPAN10Q9H1Z9 355 aaPredicted RBP15.64■□□□□ 0.09
LIME1-202ENST00000444951 PTGES2Q9H7Z7 377 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 B4GALT7Q9UBV7 327 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 DKKL1Q9UK85 242 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 SAMD4AQ9UPU9 718 aaKnown RBP15.64■□□□□ 0.09
LIME1-202ENST00000444951 VDAC3Q9Y277 283 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 C15orf41Q9Y2V0 281 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 NINQ8N4C6 2090 aa15.64■□□□□ 0.09
LIME1-202ENST00000444951 CFAP73A6NFT4 308 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 TMEM229AB2RXF0 380 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 ACOT7O00154 380 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 CBR3O75828 277 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 LGI1O95970 557 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 LINGO3P0C6S8 592 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 ELAVL4P26378 380 aaKnown RBP15.63■□□□□ 0.09
LIME1-202ENST00000444951 MSX1P28360 303 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 MAGEA5P43359 124 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 ELOAQ14241 798 aaKnown RBP15.63■□□□□ 0.09
LIME1-202ENST00000444951 ZSWIM7Q19AV6 140 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 RNFT1Q5M7Z0 435 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 ARSKQ6UWY0 536 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 CARM1Q86X55 608 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 RBM45Q8IUH3 476 aaKnown RBP15.63■□□□□ 0.09
LIME1-202ENST00000444951 EID3Q8N140 333 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 TMEM251Q8N6I4 163 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 FADS6Q8N9I5 356 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 ZFP62Q8NB50 900 aaPredicted RBP15.63■□□□□ 0.09
LIME1-202ENST00000444951 FAM71CQ8NEG0 241 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 OR5W2Q8NH69 310 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 ZNF563Q8TA94 476 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 TAAR6Q96RI8 345 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 ARHGDIGQ99819 225 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 AGPAT4Q9NRZ5 378 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 ICAM5Q9UMF0 924 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 SLC9A8Q9Y2E8 581 aa15.63■□□□□ 0.09
LIME1-202ENST00000444951 SHISA8B8ZZ34 492 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 FAM47E-STBD1D6RA91 191 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 SYT5O00445 386 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 TFECO14948 347 aaPredicted RBP15.62■□□□□ 0.09
LIME1-202ENST00000444951 ADAM11O75078 769 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 CELA3AP09093 270 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 ZNF24P17028 368 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 HK1P19367 917 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 DPP4P27487 766 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 ZNF41P51814 821 aaPredicted RBP15.62■□□□□ 0.09
LIME1-202ENST00000444951 FOXD4Q12950 439 aaPredicted RBP15.62■□□□□ 0.09
LIME1-202ENST00000444951 CBFBQ13951 182 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 TOMM34Q15785 309 aaPredicted RBP15.62■□□□□ 0.09
LIME1-202ENST00000444951 IFI44LQ53G44 452 aa15.62■□□□□ 0.09
LIME1-202ENST00000444951 DEF8Q6ZN54 512 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms