RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 BDH2Q9BUT1 245 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 HDHD5Q9BXW7 423 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 NMUR2Q9GZQ4 415 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 COQ10BQ9H8M1 238 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 GP6Q9HCN6 339 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 PCDHGB4Q9UN71 923 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 RNF103-CHMP3A0A140T963 221 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 WDR91A4D1P6 747 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 SERINC4A6NH21 518 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 ITM2AO43736 263 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 CYP7B1O75881 506 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 SERPINE1P05121 402 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 HEXAP06865 529 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 YES1P07947 543 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 QPRTQ15274 297 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 CHI3L2Q15782 390 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 KRT71Q3SY84 523 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 SLC25A53Q5H9E4 307 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 TFAP2EQ6VUC0 442 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 CLEC4FQ8N1N0 589 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 SLC43A2Q8N370 569 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 TMEM171Q8WVE6 324 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 S100PBPQ96BU1 408 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 TMEM109Q9BVC6 243 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 GSX2Q9BZM3 304 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 SERHL2Q9H4I8 314 aa18.73■□□□□ 0.59
VSX1-206ENST00000444511 RNASET2O00584 256 aaKnown RBP18.72■□□□□ 0.59
VSX1-206ENST00000444511 STX11O75558 287 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 NTN1O95631 604 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 PLAUP00749 431 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 MYZAPP0CAP1 466 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 IL32P24001 234 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 PTH2RP49190 550 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 RAC3P60763 192 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 ZNF844Q08AG5 666 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 WDR93Q6P2C0 686 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 C16orf62Q7Z3J2 963 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 GABRG1Q8N1C3 465 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 CIARTQ8N365 385 aaPredicted RBP18.72■□□□□ 0.59
VSX1-206ENST00000444511 ZNF781Q8N8C0 355 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 OR4A15Q8NGL6 344 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 DPY30Q9C005 99 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 AKTIPQ9H8T0 292 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 EXD2Q9NVH0 621 aa18.72■□□□□ 0.59
VSX1-206ENST00000444511 IGHV3-15A0A0B4J1V0 119 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 A0A1W2PNR3 127 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 HS3ST1O14792 307 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 SMAD7O15105 426 aaKnown RBP18.71■□□□□ 0.59
VSX1-206ENST00000444511 RGS16O15492 202 aaPredicted RBP18.71■□□□□ 0.59
VSX1-206ENST00000444511 FCMRO60667 390 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 GCM2O75603 506 aaPredicted RBP18.71■□□□□ 0.59
VSX1-206ENST00000444511 CSTAP01040 98 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 ENPP1P22413 925 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 ABCE1P61221 599 aaKnown RBP18.71■□□□□ 0.59
VSX1-206ENST00000444511 TSC22D1Q15714 1073 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 ZNF141Q15928 474 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 ARHGAP11BQ3KRB8 267 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 C3orf33Q6P1S2 294 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 ZNF611Q8N823 705 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 ZNF524Q96C55 264 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 OR5B2Q96R09 309 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 TMEM204Q9BSN7 226 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 THUMPD3Q9BV44 507 aaKnown RBP18.71■□□□□ 0.59
VSX1-206ENST00000444511 LAT2Q9GZY6 243 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 CXorf56Q9H5V9 222 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 KLHL9Q9P2J3 617 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 MKLN1Q9UL63 735 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 RAP2CQ9Y3L5 183 aa18.71■□□□□ 0.59
VSX1-206ENST00000444511 TRIM64A6NGJ6 449 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 TRIM64BA6NI03 449 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 ESPNB1AK53 854 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 ETV2O00321 342 aaPredicted RBP18.7■□□□□ 0.58
VSX1-206ENST00000444511 BIRC5O15392 142 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 LY6G6DO95868 133 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 AGR2O95994 175 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 SKP2Q13309 424 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 TIGD2Q4W5G0 525 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 SFRP5Q5T4F7 317 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 ATAD3BQ5T9A4 648 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 EIF3MQ7L2H7 374 aaKnown RBP18.7■□□□□ 0.58
VSX1-206ENST00000444511 OLIG3Q7RTU3 272 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 VPS37AQ8NEZ2 397 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 OR8J2Q8NGG1 315 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 ST8SIA1Q92185 356 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 AKAP1Q92667 903 aaKnown RBP eCLIP18.7■□□□□ 0.58
VSX1-206ENST00000444511 KISS1RQ969F8 398 aaPredicted RBP18.7■□□□□ 0.58
VSX1-206ENST00000444511 ZNF350Q9GZX5 532 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 QRSL1Q9H0R6 528 aaKnown RBP18.7■□□□□ 0.58
VSX1-206ENST00000444511 OR51I1Q9H343 314 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 NGBQ9NPG2 151 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 SERINC1Q9NRX5 453 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 KCNE5Q9UJ90 142 aa18.7■□□□□ 0.58
VSX1-206ENST00000444511 TMCC2O75069 709 aa18.69■□□□□ 0.58
VSX1-206ENST00000444511 UGT2B17O75795 530 aa18.69■□□□□ 0.58
VSX1-206ENST00000444511 SNUPNO95149 360 aaKnown RBP18.69■□□□□ 0.58
VSX1-206ENST00000444511 CPSF4O95639 269 aaKnown RBP18.69■□□□□ 0.58
VSX1-206ENST00000444511 ADAP00813 363 aa18.69■□□□□ 0.58
VSX1-206ENST00000444511 UBTFL6P0CB48 400 aaPredicted RBP18.69■□□□□ 0.58
VSX1-206ENST00000444511 PGCP20142 388 aa18.69■□□□□ 0.58
VSX1-206ENST00000444511 CASP9P55211 416 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 274.9 ms