RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 PARP8Q8N3A8 854 aa8.71□□□□□ -1.02
SMPD4P1-203ENST00000443839 LSMEM1Q8N8F7 131 aa8.71□□□□□ -1.02
SMPD4P1-203ENST00000443839 PIGXQ8TBF5 258 aa8.71□□□□□ -1.02
SMPD4P1-203ENST00000443839 NKD1Q969G9 470 aa8.71□□□□□ -1.02
SMPD4P1-203ENST00000443839 KIAA1143Q96AT1 154 aaPredicted RBP8.71□□□□□ -1.02
SMPD4P1-203ENST00000443839 RASL10BQ96S79 203 aa8.71□□□□□ -1.02
SMPD4P1-203ENST00000443839 SPOCK3Q9BQ16 436 aa8.71□□□□□ -1.02
SMPD4P1-203ENST00000443839 GABARAPL3Q9BY60 117 aa8.71□□□□□ -1.02
SMPD4P1-203ENST00000443839 UCK2Q9BZX2 261 aa8.71□□□□□ -1.02
SMPD4P1-203ENST00000443839 GRIP2Q9C0E4 1043 aa8.71□□□□□ -1.02
SMPD4P1-203ENST00000443839 ING2Q9H160 280 aa8.71□□□□□ -1.02
SMPD4P1-203ENST00000443839 GPN2Q9H9Y4 310 aaPredicted RBP8.71□□□□□ -1.02
SMPD4P1-203ENST00000443839 KRCC1Q9NPI7 259 aaPredicted RBP8.71□□□□□ -1.02
SMPD4P1-203ENST00000443839 EXOSC3Q9NQT5 275 aaKnown RBP8.71□□□□□ -1.02
SMPD4P1-203ENST00000443839 MRPS18BQ9Y676 258 aaKnown RBP8.71□□□□□ -1.02
SMPD4P1-203ENST00000443839 CFAP47Q6ZTR5 3102 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 A0A0B4J2E0 115 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 A0A1B0GX12 115 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 CDRT15L2A8MXV6 281 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 TERTO14746 1132 aaKnown RBP8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 OIP5O43482 229 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 CHP2O43745 196 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 GMFGO60234 142 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 FADS1O60427 444 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 GFRA3O60609 400 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 NTN1O95631 604 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 ANGPTL1O95841 491 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 NUDT14O95848 222 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 PTNP21246 168 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 ITPKBP27987 946 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 EPHA2P29317 976 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 GSSP48637 474 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 LSM11P83369 360 aaKnown RBP eCLIP8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 ALDH6A1Q02252 535 aaKnown RBP8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 DYNC1I2Q13409 638 aaKnown RBP8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 LSAMPQ13449 338 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 ULK3Q6PHR2 472 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 KLHL17Q6TDP4 642 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 TMPRSS7Q7RTY8 843 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 NRMQ8IXM6 262 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 APOL4Q9BPW4 351 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 DGCR6LQ9BY27 220 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 MRPS26Q9BYN8 205 aaKnown RBP8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 RTN4RQ9BZR6 473 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 VCX3AQ9NNX9 186 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 PNPLA3Q9NST1 481 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 KLRF1Q9NZS2 232 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 GMPPBQ9Y5P6 360 aa8.7□□□□□ -1.02
SMPD4P1-203ENST00000443839 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 H3BN98 237 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 MASP2O00187 686 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 OR6B1O95007 311 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 CLPTM1O96005 669 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 FBXO45P0C2W1 286 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 POU1F1P28069 291 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 SLC6A8P48029 635 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 IDH2P48735 452 aaKnown RBP8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 SH3BGRP55822 239 aaPredicted RBP8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 RPP38P78345 283 aaKnown RBP8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 ZNF117Q03924 483 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 IL18R1Q13478 541 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 APOFQ13790 326 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 KEAP1Q14145 624 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 FCRLBQ6BAA4 426 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 C1orf94Q6P1W5 598 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 WDR88Q6ZMY6 472 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 MBOAT2Q6ZWT7 520 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 NUP54Q7Z3B4 507 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 ZER1Q7Z7L7 766 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 MEX3DQ86XN8 651 aaKnown RBP8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 SLC15A4Q8N697 577 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 SETD9Q8NE22 299 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 OR10G3Q8NGC4 313 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 ZNF563Q8TA94 476 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 DNAJA4Q8WW22 397 aaPredicted RBP8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 TMEM239Q8WW34 195 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 TTC9Q92623 222 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 DGCR14Q96DF8 476 aaKnown RBP8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 SPACA9Q96E40 222 aaPredicted RBP8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 FAM46AQ96IP4 442 aaKnown RBP8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 NODALQ96S42 347 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 PRSS27Q9BQR3 290 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 LAT2Q9GZY6 243 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 ASCL3Q9NQ33 180 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 DLL3Q9NYJ7 618 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 CNIH4Q9P003 139 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 IL17BQ9UHF5 180 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 YARS2Q9Y2Z4 477 aaKnown RBP8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 KPNA4O00629 521 aaPredicted RBP8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 EIF4E2O60573 245 aaKnown RBP8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 SOX14O95416 240 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 GSTM3P21266 225 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 SOX3P41225 446 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 RPS6KA3P51812 740 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 ESRRGP62508 458 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 IL5RAQ01344 420 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 COX10Q12887 443 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 RAPSNQ13702 412 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 ATP1A4Q13733 1029 aa8.69□□□□□ -1.02
SMPD4P1-203ENST00000443839 TGIF1Q15583 401 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms