RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 UBQLNLQ8IYU4 475 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF619Q8N2I2 560 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF565Q8N9K5 539 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 OR4M2Q8NGB6 313 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 SLC2A12Q8TD20 617 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 PHF10Q8WUB8 498 aaKnown RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 ZG16BQ96DA0 208 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 SLC46A1Q96NT5 459 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 TRAF4Q9BUZ4 470 aaPredicted RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 RSPO3Q9BXY4 272 aaPredicted RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 SLC26A1Q9H2B4 701 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 SOX17Q9H6I2 414 aaPredicted RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 MCCC2Q9HCC0 563 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 KLHL28Q9NXS3 571 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 VNN3Q9NY84 501 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 OR10H1Q9Y4A9 318 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 ADAMTS20P59510 1910 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 ASCC3Q8N3C0 2202 aaKnown RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 PPM1BO75688 479 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 SCO1O75880 301 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 LGI1O95970 557 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 IGKV3-11P04433 115 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 IL7RP16871 459 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 NBL1P41271 181 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 YAP1P46937 504 aaKnown RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 RFX3P48380 749 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 HLCSP50747 726 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 ALDH3A2P51648 485 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 SLC37A1P57057 533 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 STPG1Q5TH74 334 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 TBPL2Q6SJ96 375 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 LANCL3Q6ZV70 420 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 CYP4Z1Q86W10 505 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 VRK2Q86Y07 508 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 HS3ST5Q8IZT8 346 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 OR52H1Q8NGJ2 320 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 MR1Q95460 341 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 FBXW5Q969U6 566 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 ITPAQ9BY32 194 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 SAP130Q9H0E3 1048 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 COPS7AQ9UBW8 275 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 GPN3Q9UHW5 284 aaPredicted RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 C3orf18Q9UK00 162 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 NXT1Q9UKK6 140 aaKnown RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 PRELID3BQ9Y3B1 194 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 MAGED1Q9Y5V3 778 aaPredicted RBP7.47□□□□□ -1.21
CCDC39-201ENST00000442201 OTOGLQ3ZCN5 2332 aa7.47□□□□□ -1.21
CCDC39-201ENST00000442201 SH3D21A4FU49 640 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 AGAP5A6NIR3 686 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 C9J4A7 227 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 DLGAP1O14490 977 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 BRINP1O60477 761 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 ALOX12BO75342 701 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 CSO75390 466 aaKnown RBP7.46□□□□□ -1.21
CCDC39-201ENST00000442201 SNAP29O95721 258 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 DDAH2O95865 285 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 MT-CO3P00414 261 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 HPRP00739 348 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 JMJD7P0C870 316 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 CT45A8P0DMV1 189 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 CT45A9P0DMV2 189 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 FOXL2P58012 376 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 SPIBQ01892 262 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 TRIP6Q15654 476 aaKnown RBP7.46□□□□□ -1.21
CCDC39-201ENST00000442201 CT45A2Q5DJT8 189 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 CDCP2Q5VXM1 449 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 DESI1Q6ICB0 168 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 OR7E24Q6IFN5 339 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 XKRXQ6PP77 449 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 TMEM179BQ7Z7N9 219 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 MORN4Q8NDC4 146 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 OR8K3Q8NH51 312 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 RHOXF1Q8NHV9 184 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 HDAC2Q92769 488 aaKnown RBP7.46□□□□□ -1.21
CCDC39-201ENST00000442201 LIN37Q96GY3 246 aaPredicted RBP7.46□□□□□ -1.21
CCDC39-201ENST00000442201 SPSB2Q99619 263 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 EPYCQ99645 322 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 RBM4BQ9BQ04 359 aaKnown RBP7.46□□□□□ -1.21
CCDC39-201ENST00000442201 ZPBPQ9BS86 351 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 CRB3Q9BUF7 120 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 RBM4Q9BWF3 364 aaKnown RBP7.46□□□□□ -1.21
CCDC39-201ENST00000442201 SMPD3Q9NY59 655 aaPredicted RBP7.46□□□□□ -1.21
CCDC39-201ENST00000442201 MYO15AQ9UKN7 3530 aa7.46□□□□□ -1.21
CCDC39-201ENST00000442201 SAGE2PA6NJ88 616 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 M0R3H8 397 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 TNFRSF11BO00300 401 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 KIAA0513O60268 411 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 ABCB7O75027 752 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 SERPINI2O75830 405 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 CLPSP04118 112 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 ALPLP05186 524 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 DBIP07108 87 aaKnown RBP7.46□□□□□ -1.22
CCDC39-201ENST00000442201 THBS1P07996 1170 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 CYC1P08574 325 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 SPNP16150 400 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 PPICP45877 212 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 CDH12P55289 794 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 BPIFB3P59826 476 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 RPP38P78345 283 aaKnown RBP7.46□□□□□ -1.22
CCDC39-201ENST00000442201 NNATQ16517 81 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms