RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 SH2D2AQ9NP31 389 aa25.52■■□□□ 1.68
CGREF1-207ENST00000440612 SLC16A6O15403 523 aa25.51■■□□□ 1.67
CGREF1-207ENST00000440612 HCRTR2O43614 444 aa25.51■■□□□ 1.67
CGREF1-207ENST00000440612 CHP2O43745 196 aa25.51■■□□□ 1.67
CGREF1-207ENST00000440612 LINGO3P0C6S8 592 aa25.51■■□□□ 1.67
CGREF1-207ENST00000440612 ENDOUP21128 410 aaKnown RBP25.51■■□□□ 1.67
CGREF1-207ENST00000440612 SSR4P51571 173 aa25.51■■□□□ 1.67
CGREF1-207ENST00000440612 ATP1A1-AS1Q5TC04 95 aa25.51■■□□□ 1.67
CGREF1-207ENST00000440612 ZNF468Q5VIY5 522 aaPredicted RBP25.51■■□□□ 1.67
CGREF1-207ENST00000440612 OPN5Q6U736 354 aa25.51■■□□□ 1.67
CGREF1-207ENST00000440612 MBOAT2Q6ZWT7 520 aa25.51■■□□□ 1.67
CGREF1-207ENST00000440612 PRICKLE2Q7Z3G6 844 aa25.51■■□□□ 1.67
CGREF1-207ENST00000440612 PARP8Q8N3A8 854 aa25.51■■□□□ 1.67
CGREF1-207ENST00000440612 DUSP19Q8WTR2 217 aa25.51■■□□□ 1.67
CGREF1-207ENST00000440612 REV1Q9UBZ9 1251 aa25.51■■□□□ 1.67
CGREF1-207ENST00000440612 WASF3Q9UPY6 502 aa25.51■■□□□ 1.67
CGREF1-207ENST00000440612 POFUT2Q9Y2G5 429 aa25.51■■□□□ 1.67
CGREF1-207ENST00000440612 CELSR3Q9NYQ7 3312 aa25.51■■□□□ 1.67
CGREF1-207ENST00000440612 WT1P19544 449 aaPredicted RBP25.5■■□□□ 1.67
CGREF1-207ENST00000440612 OMPP47874 163 aa25.5■■□□□ 1.67
CGREF1-207ENST00000440612 ZNF730Q6ZMV8 503 aa25.5■■□□□ 1.67
CGREF1-207ENST00000440612 CADM2Q8N3J6 435 aa25.5■■□□□ 1.67
CGREF1-207ENST00000440612 SIRT6Q8N6T7 355 aa25.5■■□□□ 1.67
CGREF1-207ENST00000440612 C3orf49Q96BT1 292 aa25.5■■□□□ 1.67
CGREF1-207ENST00000440612 CNBD2Q96M20 576 aa25.5■■□□□ 1.67
CGREF1-207ENST00000440612 ORC6Q9Y5N6 252 aa25.5■■□□□ 1.67
CGREF1-207ENST00000440612 C2orf72A6NCS6 295 aa25.49■■□□□ 1.67
CGREF1-207ENST00000440612 KLF4O43474 513 aa25.49■■□□□ 1.67
CGREF1-207ENST00000440612 PIP5K1CO60331 668 aa25.49■■□□□ 1.67
CGREF1-207ENST00000440612 TP53P04637 393 aaPredicted RBP25.49■■□□□ 1.67
CGREF1-207ENST00000440612 MYF6P23409 242 aa25.49■■□□□ 1.67
CGREF1-207ENST00000440612 IDH2P48735 452 aaKnown RBP25.49■■□□□ 1.67
CGREF1-207ENST00000440612 CLK3P49761 638 aaKnown RBP25.49■■□□□ 1.67
CGREF1-207ENST00000440612 UGT2B15P54855 530 aa25.49■■□□□ 1.67
CGREF1-207ENST00000440612 IL1RL1Q01638 556 aa25.49■■□□□ 1.67
CGREF1-207ENST00000440612 PDK3Q15120 406 aa25.49■■□□□ 1.67
CGREF1-207ENST00000440612 ALG10BQ5I7T1 473 aa25.49■■□□□ 1.67
CGREF1-207ENST00000440612 ULK3Q6PHR2 472 aa25.49■■□□□ 1.67
CGREF1-207ENST00000440612 IL20RBQ6UXL0 311 aa25.49■■□□□ 1.67
CGREF1-207ENST00000440612 CD300LDQ6UXZ3 194 aa25.49■■□□□ 1.67
CGREF1-207ENST00000440612 MEX3DQ86XN8 651 aaKnown RBP25.49■■□□□ 1.67
CGREF1-207ENST00000440612 MISPQ8IVT2 679 aa25.49■■□□□ 1.67
CGREF1-207ENST00000440612 OR5W2Q8NH69 310 aa25.49■■□□□ 1.67
CGREF1-207ENST00000440612 RIBC2Q9H4K1 309 aa25.49■■□□□ 1.67
CGREF1-207ENST00000440612 PTNP21246 168 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 CASP3P42574 277 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 NPRL3Q12980 569 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 CLN3Q13286 438 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 TOMM34Q15785 309 aaPredicted RBP25.48■■□□□ 1.67
CGREF1-207ENST00000440612 TBC1D25Q3MII6 688 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 NRMQ8IXM6 262 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 TMCO5AQ8N6Q1 288 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 ASB15Q8WXK1 588 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 THOC3Q96J01 351 aaKnown RBP25.48■■□□□ 1.67
CGREF1-207ENST00000440612 LOC100130705A0A1B0GUX0 176 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 SDHBP21912 280 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 SLC6A8P48029 635 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 CCR4P51679 360 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 ACER2Q5QJU3 275 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 SWT1Q5T5J6 900 aaKnown RBP25.48■■□□□ 1.67
CGREF1-207ENST00000440612 WBP2NLQ6ICG8 309 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 JMJD6Q6NYC1 403 aaPredicted RBP25.48■■□□□ 1.67
CGREF1-207ENST00000440612 TMEM81Q6P7N7 255 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 UGT2A3Q6UWM9 527 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 TMEM239Q8WW34 195 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 NXPE2Q96DL1 559 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 UCK2Q9BZX2 261 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 ZNF556Q9HAH1 456 aa25.48■■□□□ 1.67
CGREF1-207ENST00000440612 MEPEQ9NQ76 525 aaPredicted RBP25.48■■□□□ 1.67
CGREF1-207ENST00000440612 RYDENQ9NUL5 291 aaKnown RBP25.48■■□□□ 1.67
CGREF1-207ENST00000440612 WISP1O95388 367 aa25.47■■□□□ 1.67
CGREF1-207ENST00000440612 GSSP48637 474 aa25.47■■□□□ 1.67
CGREF1-207ENST00000440612 P2RX1P51575 399 aa25.47■■□□□ 1.67
CGREF1-207ENST00000440612 C17orf67Q0P5P2 114 aa25.47■■□□□ 1.67
CGREF1-207ENST00000440612 TTC23Q5W5X9 447 aa25.47■■□□□ 1.67
CGREF1-207ENST00000440612 DNAJA4Q8WW22 397 aaPredicted RBP25.47■■□□□ 1.67
CGREF1-207ENST00000440612 MPP4Q96JB8 637 aa25.47■■□□□ 1.67
CGREF1-207ENST00000440612 MUS81Q96NY9 551 aa25.47■■□□□ 1.67
CGREF1-207ENST00000440612 ADAM19Q9H013 955 aa25.47■■□□□ 1.67
CGREF1-207ENST00000440612 NDRG4Q9ULP0 352 aaKnown RBP25.47■■□□□ 1.67
CGREF1-207ENST00000440612 IGLV3-32A0A0A0MS00 114 aa25.46■■□□□ 1.67
CGREF1-207ENST00000440612 RPSAP08865 295 aaKnown RBP25.46■■□□□ 1.67
CGREF1-207ENST00000440612 COPZ1P61923 177 aa25.46■■□□□ 1.67
CGREF1-207ENST00000440612 FOXC1Q12948 553 aa25.46■■□□□ 1.67
CGREF1-207ENST00000440612 COL28A1Q2UY09 1125 aa25.46■■□□□ 1.67
CGREF1-207ENST00000440612 OR5M10Q6IEU7 315 aa25.46■■□□□ 1.67
CGREF1-207ENST00000440612 Q6ZPB1 254 aaPredicted RBP25.46■■□□□ 1.67
CGREF1-207ENST00000440612 ATG4DQ86TL0 474 aaPredicted RBP25.46■■□□□ 1.67
CGREF1-207ENST00000440612 DND1Q8IYX4 353 aaKnown RBP25.46■■□□□ 1.67
CGREF1-207ENST00000440612 RNF113BQ8IZP6 322 aaKnown RBP25.46■■□□□ 1.67
CGREF1-207ENST00000440612 PFN4Q8NHR9 129 aa25.46■■□□□ 1.67
CGREF1-207ENST00000440612 B4GALNT2Q8NHY0 566 aa25.46■■□□□ 1.67
CGREF1-207ENST00000440612 GPR119Q8TDV5 335 aa25.46■■□□□ 1.67
CGREF1-207ENST00000440612 FRMD6Q96NE9 622 aa25.46■■□□□ 1.67
CGREF1-207ENST00000440612 SECISBP2Q96T21 854 aaKnown RBP25.46■■□□□ 1.67
CGREF1-207ENST00000440612 PROK2Q9HC23 129 aa25.46■■□□□ 1.67
CGREF1-207ENST00000440612 C20orf141Q9NUB4 165 aa25.46■■□□□ 1.67
CGREF1-207ENST00000440612 A0A087WUJ7 227 aa25.45■■□□□ 1.67
CGREF1-207ENST00000440612 GMFGO60234 142 aa25.45■■□□□ 1.67
CGREF1-207ENST00000440612 CDH2P19022 906 aaPredicted RBP25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms