RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 RBM4BQ9BQ04 359 aaKnown RBP14.65□□□□□ -0.06
UBE2F-214ENST00000440223 RBM4Q9BWF3 364 aaKnown RBP14.65□□□□□ -0.06
UBE2F-214ENST00000440223 TRIM2Q9C040 744 aa14.65□□□□□ -0.06
UBE2F-214ENST00000440223 ANKRD19PQ9H560 264 aa14.65□□□□□ -0.06
UBE2F-214ENST00000440223 NTN4Q9HB63 628 aa14.65□□□□□ -0.06
UBE2F-214ENST00000440223 EXOSC3Q9NQT5 275 aaKnown RBP14.65□□□□□ -0.06
UBE2F-214ENST00000440223 SDHAF3Q9NRP4 125 aa14.65□□□□□ -0.06
UBE2F-214ENST00000440223 RLIMQ9NVW2 624 aa14.65□□□□□ -0.06
UBE2F-214ENST00000440223 DNAJB12Q9NXW2 375 aaKnown RBP14.65□□□□□ -0.06
UBE2F-214ENST00000440223 ACAD8Q9UKU7 415 aa14.65□□□□□ -0.06
UBE2F-214ENST00000440223 LYVE1Q9Y5Y7 322 aa14.65□□□□□ -0.06
UBE2F-214ENST00000440223 U3KQV3 271 aa14.65□□□□□ -0.06
UBE2F-214ENST00000440223 MPDZO75970 2070 aa14.65□□□□□ -0.06
UBE2F-214ENST00000440223 TRAPPC13A5PLN9 417 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 CLDN24A6NM45 220 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 CPSF4LA6NMK7 179 aaKnown RBP14.64□□□□□ -0.07
UBE2F-214ENST00000440223 H0YJX3 145 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 J3KTA2 159 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 ZNF264O43296 627 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 MAN1A2O60476 641 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 EIF4E2O60573 245 aaKnown RBP14.64□□□□□ -0.07
UBE2F-214ENST00000440223 CCNB2O95067 398 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 RASAL1O95294 804 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 WISP1O95388 367 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 THRBP10828 461 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 FBXW4P57775 412 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 DAG1Q14118 895 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 TRAM2Q15035 370 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 NPTX1Q15818 432 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 NTRK2Q16620 822 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 PRR30Q53SZ7 412 aaPredicted RBP14.64□□□□□ -0.07
UBE2F-214ENST00000440223 DCST1Q5T197 706 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 PPP4R4Q6NUP7 873 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 FAM180AQ6UWF9 173 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 C16orf47Q6ZP98 133 aaPredicted RBP14.64□□□□□ -0.07
UBE2F-214ENST00000440223 PACS2Q86VP3 889 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 COMTD1Q86VU5 262 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 RBM45Q8IUH3 476 aaKnown RBP14.64□□□□□ -0.07
UBE2F-214ENST00000440223 EPHX4Q8IUS5 362 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 GALNT4Q8N4A0 578 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 CISD2Q8N5K1 135 aaKnown RBP14.64□□□□□ -0.07
UBE2F-214ENST00000440223 GATSQ8NAP1 163 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 POGLUT1Q8NBL1 392 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 GIPC3Q8TF64 312 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 CNOT9Q92600 299 aaKnown RBP14.64□□□□□ -0.07
UBE2F-214ENST00000440223 HGDQ93099 445 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 SNRNP40Q96DI7 357 aaKnown RBP14.64□□□□□ -0.07
UBE2F-214ENST00000440223 DHRS1Q96LJ7 313 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 C5orf34Q96MH7 638 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 ZNF184Q99676 751 aaPredicted RBP14.64□□□□□ -0.07
UBE2F-214ENST00000440223 LAT2Q9GZY6 243 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 GABARAPL1Q9H0R8 117 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 METTL7AQ9H8H3 244 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 COQ10BQ9H8M1 238 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 KRCC1Q9NPI7 259 aaPredicted RBP14.64□□□□□ -0.07
UBE2F-214ENST00000440223 HPF1Q9NWY4 346 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 KLRF1Q9NZS2 232 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 PDP1Q9P0J1 537 aaPredicted RBP14.64□□□□□ -0.07
UBE2F-214ENST00000440223 CHST2Q9Y4C5 530 aa14.64□□□□□ -0.07
UBE2F-214ENST00000440223 PYCARD-AS1I3L0S3 204 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 FAAHO00519 579 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 SCO2O43819 266 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 GKN3PP0CG01 181 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 CD46P15529 392 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 CDH2P19022 906 aaPredicted RBP14.63□□□□□ -0.07
UBE2F-214ENST00000440223 CD96P40200 585 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 SOX3P41225 446 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 CYB561P49447 251 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 RNF144AP50876 292 aaPredicted RBP14.63□□□□□ -0.07
UBE2F-214ENST00000440223 CCR4P51679 360 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 EPS8Q12929 822 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 OR1C1Q15619 314 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 IGFBP7Q16270 282 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 EXOC3L2Q2M3D2 409 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 ZNF766Q5HY98 468 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 ENTPD8Q5MY95 495 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 OTUD3Q5T2D3 398 aaPredicted RBP14.63□□□□□ -0.07
UBE2F-214ENST00000440223 FNDC7Q5VTL7 733 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 ZNF613Q6PF04 617 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 TSEN54Q7Z6J9 526 aaKnown RBP14.63□□□□□ -0.07
UBE2F-214ENST00000440223 TMEM178AQ8NBL3 297 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 GALNT11Q8NCW6 608 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 FAM71CQ8NEG0 241 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 OR5M3Q8NGP4 307 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 DNAJC9Q8WXX5 260 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 SLC38A4Q969I6 547 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 ALPK1Q96QP1 1244 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 SECISBP2Q96T21 854 aaKnown RBP14.63□□□□□ -0.07
UBE2F-214ENST00000440223 RSPO3Q9BXY4 272 aaPredicted RBP14.63□□□□□ -0.07
UBE2F-214ENST00000440223 Q9H521 79 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 NMNAT1Q9HAN9 279 aaPredicted RBP14.63□□□□□ -0.07
UBE2F-214ENST00000440223 ANKRD10Q9NXR5 420 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 VNN3Q9NY84 501 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 FLRT3Q9NZU0 649 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 LRFN1Q9P244 771 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 PRDM4Q9UKN5 801 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 A4GNTQ9UNA3 340 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 PCDHGB6Q9Y5F9 930 aa14.63□□□□□ -0.07
UBE2F-214ENST00000440223 A0A1W2PRQ8 180 aa14.62□□□□□ -0.07
UBE2F-214ENST00000440223 ARRDC5A6NEK1 342 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms