RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 ZNF136P52737 540 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 FXYD4P59646 89 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 SEC61A1P61619 476 aaKnown RBP13.78□□□□□ -0.2
PCNX1-202ENST00000439984 MRPS10P82664 201 aaKnown RBP13.78□□□□□ -0.2
PCNX1-202ENST00000439984 MLIPQ5VWP3 458 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 GPR139Q6DWJ6 353 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 TRNP1Q6NT89 227 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 DNM1P34Q6PK57 102 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 SLC16A13Q7RTY0 426 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 ZNF558Q96NG5 402 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 PIGMQ9H3S5 423 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 C1GALT1Q9NS00 363 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 S100A8P05109 93 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 MSR1P21757 451 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 HCCSP53701 268 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 UBE2MP61081 183 aaKnown RBP13.78□□□□□ -0.2
PCNX1-202ENST00000439984 AWAT2Q6E213 333 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 FUT10Q6P4F1 479 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 Q6ZVL8 140 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 AKR7LQ8NHP1 331 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 USP36Q9P275 1121 aaKnown RBP13.78□□□□□ -0.2
PCNX1-202ENST00000439984 POM121BA6NF01 834 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 SCDO00767 359 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 CCL16O15467 120 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 KCNJ13O60928 360 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 CLDN20P56880 219 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 TXNDC8Q6A555 127 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 B3GNT9Q6UX72 402 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 TRIB3Q96RU7 358 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 OCSTAMPQ9BR26 566 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 TRAF4Q9BUZ4 470 aaPredicted RBP13.78□□□□□ -0.2
PCNX1-202ENST00000439984 B4GALT6Q9UBX8 382 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 FLVCR2Q9UPI3 526 aa13.78□□□□□ -0.2
PCNX1-202ENST00000439984 LRP5O75197 1615 aa13.77□□□□□ -0.2
PCNX1-202ENST00000439984 ACOD1A6NK06 481 aa13.77□□□□□ -0.2
PCNX1-202ENST00000439984 CCSO14618 274 aa13.77□□□□□ -0.2
PCNX1-202ENST00000439984 SYPP08247 313 aa13.77□□□□□ -0.2
PCNX1-202ENST00000439984 GIPRP48546 466 aa13.77□□□□□ -0.2
PCNX1-202ENST00000439984 KCTD18Q6PI47 426 aaPredicted RBP13.77□□□□□ -0.2
PCNX1-202ENST00000439984 GAREM2Q75VX8 874 aa13.77□□□□□ -0.2
PCNX1-202ENST00000439984 UMODL1-AS1Q8N2C9 162 aa13.77□□□□□ -0.2
PCNX1-202ENST00000439984 OR8J2Q8NGG1 315 aa13.77□□□□□ -0.2
PCNX1-202ENST00000439984 HS6ST2Q96MM7 605 aa13.77□□□□□ -0.2
PCNX1-202ENST00000439984 SLC19A3Q9BZV2 496 aa13.77□□□□□ -0.2
PCNX1-202ENST00000439984 CD53P19397 219 aa13.77□□□□□ -0.2
PCNX1-202ENST00000439984 CDK2P24941 298 aa13.77□□□□□ -0.2
PCNX1-202ENST00000439984 TACR1P25103 407 aa13.77□□□□□ -0.2
PCNX1-202ENST00000439984 LYPD8Q6UX82 237 aa13.77□□□□□ -0.2
PCNX1-202ENST00000439984 PIANPQ8IYJ0 282 aa13.77□□□□□ -0.2
PCNX1-202ENST00000439984 SLIRPQ9GZT3 109 aaKnown RBP13.77□□□□□ -0.2
PCNX1-202ENST00000439984 UBL3O95164 117 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 C6P13671 934 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 ZP3P21754 424 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 NR0B1P51843 470 aaKnown RBP13.77□□□□□ -0.21
PCNX1-202ENST00000439984 XAF1Q6GPH4 301 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 CNTN4Q8IWV2 1026 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 UBE2J1Q9Y385 318 aaPredicted RBP13.77□□□□□ -0.21
PCNX1-202ENST00000439984 TRIM77I1YAP6 450 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 EMC8O43402 210 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 OR13C7P0DN81 318 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 SDHBP21912 280 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 SCAPQ12770 1279 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 DNAAF1Q8NEP3 725 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 SEMA4CQ9C0C4 833 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 SLC6A16Q9GZN6 736 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 ZNF175Q9Y473 711 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 STRCP1A6NGW2 1772 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 CCDC163A0A0D9SF12 145 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 PIRO00625 290 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 ETV6P41212 452 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 TMEM179BQ7Z7N9 219 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 BBS1Q8NFJ9 593 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 TMEM121BQ9BXQ6 578 aaPredicted RBP13.77□□□□□ -0.21
PCNX1-202ENST00000439984 PCDHGA2Q9Y5H1 932 aa13.77□□□□□ -0.21
PCNX1-202ENST00000439984 PFKMP08237 780 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 HSF5Q4G112 596 aaPredicted RBP13.76□□□□□ -0.21
PCNX1-202ENST00000439984 PRSS36Q5K4E3 855 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 KIAA0907Q7Z7F0 614 aaPredicted RBP13.76□□□□□ -0.21
PCNX1-202ENST00000439984 LUZP4Q9P127 313 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 TMEM235A6NFC5 223 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 SHOXO15266 292 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 AKR1C3P42330 323 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 FAM110CQ1W6H9 321 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 HIST2H3AQ71DI3 136 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 JSRP1Q96MG2 331 aaPredicted RBP13.76□□□□□ -0.21
PCNX1-202ENST00000439984 BTBD2Q9BX70 525 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 MEPEQ9NQ76 525 aaPredicted RBP13.76□□□□□ -0.21
PCNX1-202ENST00000439984 TMEM115Q12893 351 aaPredicted RBP13.76□□□□□ -0.21
PCNX1-202ENST00000439984 OR14C36Q8NHC7 312 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 SMIM14Q96QK8 99 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 RLIMQ9NVW2 624 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 SPHK1Q9NYA1 384 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 TESQ9UGI8 421 aaKnown RBP13.76□□□□□ -0.21
PCNX1-202ENST00000439984 NDRG3Q9UGV2 375 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 HTR3BO95264 441 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 NQO2P16083 231 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 RPE65Q16518 533 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 Q6ZSR9 355 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 ABHD13Q7L211 337 aa13.76□□□□□ -0.21
PCNX1-202ENST00000439984 TPRA1Q86W33 373 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms