RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 OPALINQ96PE5 141 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 CCNL2Q96S94 520 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 NUDT9Q9BW91 350 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 TGIF2Q9GZN2 237 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 VN1R1Q9GZP7 353 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 NXF5Q9H1B4 397 aaKnown RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 UBQLN4Q9NRR5 601 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 RPS6KB2Q9UBS0 482 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 CLEC2DQ9UHP7 191 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 OSGIN1Q9UJX0 560 aa10.84□□□□□ -0.67
SMAD3-202ENST00000439724 ATXN7L1Q9ULK2 861 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-202ENST00000439724 SDK1Q7Z5N4 2213 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 KPNA4O00629 521 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-202ENST00000439724 ARHGAP33O14559 1287 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 TO15178 435 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 PTP4A3O75365 173 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 RFPL3O75679 317 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 NADKO95544 446 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-202ENST00000439724 CH25HO95992 272 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 BMP7P18075 431 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 BMXP51813 675 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 MLLT11Q13015 90 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-202ENST00000439724 C1DQ13901 141 aaKnown RBP10.83□□□□□ -0.68
SMAD3-202ENST00000439724 DOC2BQ14184 412 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 NSDHLQ15738 373 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 SSX1Q16384 188 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 SMARCD3Q6STE5 483 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 USP43Q70EL4 1123 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 C1orf210Q8IVY1 113 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 CACTIN-AS1Q8N1I8 211 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 OR13C2Q8NGS9 318 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 DNAJA4Q8WW22 397 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-202ENST00000439724 EFHD2Q96C19 240 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-202ENST00000439724 ARSGQ96EG1 525 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 DACH2Q96NX9 599 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 LMF1Q96S06 567 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 DCSTAMPQ9H295 470 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 LRRN3Q9H3W5 708 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 GAREM1Q9H706 876 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 EXOSC3Q9NQT5 275 aaKnown RBP10.83□□□□□ -0.68
SMAD3-202ENST00000439724 FSCN3Q9NQT6 498 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 ICAM5Q9UMF0 924 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 BAIAP2Q9UQB8 552 aa10.83□□□□□ -0.68
SMAD3-202ENST00000439724 EXOSC1Q9Y3B2 195 aaKnown RBP10.83□□□□□ -0.68
SMAD3-202ENST00000439724 IGHV5-10-1A0A0J9YXX1 117 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 TMEM129A0AVI4 362 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 OR6C76A6NM76 312 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 UTS2O95399 124 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 CFIP05156 583 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 NGFRP08138 427 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 HBQ1P09105 142 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 ATXN8OSP0DMR3 200 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 SAGP10523 405 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-202ENST00000439724 CKMT1AP12532 417 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 MYL12AP19105 171 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 FUT1P19526 365 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 HTR1FP30939 366 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 EBPQ15125 230 aaKnown RBP10.82□□□□□ -0.68
SMAD3-202ENST00000439724 CLPPQ16740 277 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-202ENST00000439724 NDUFAF6Q330K2 333 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 CXXC5Q7LFL8 322 aaKnown RBP10.82□□□□□ -0.68
SMAD3-202ENST00000439724 ADCK1Q86TW2 530 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 GID4Q8IVV7 300 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 C9orf40Q8IXQ3 194 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 CADM2Q8N3J6 435 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 CLIP3Q96DZ5 547 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 JAM3Q9BX67 310 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 SLIRPQ9GZT3 109 aaKnown RBP10.82□□□□□ -0.68
SMAD3-202ENST00000439724 OR51E2Q9H255 320 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 PALMDQ9NP74 551 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 ISYNA1Q9NPH2 558 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 HINT3Q9NQE9 182 aaKnown RBP10.82□□□□□ -0.68
SMAD3-202ENST00000439724 SLC22A11Q9NSA0 550 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 COPS7AQ9UBW8 275 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 CTSFQ9UBX1 484 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 MKL2Q9ULH7 1088 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 EXOGQ9Y2C4 368 aaKnown RBP10.82□□□□□ -0.68
SMAD3-202ENST00000439724 PMF1-BGLAPU3KQ54 211 aa10.82□□□□□ -0.68
SMAD3-202ENST00000439724 ADAMTS9Q9P2N4 1935 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 A0A087WUJ7 227 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 C2orf92A0A1B0GVN3 265 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 HTR3EA5X5Y0 456 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 FAM86C2PA6NEL3 165 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 SCDO00767 359 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 SLC2A10O95528 541 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 ONECUT2O95948 504 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 UBL4AP11441 157 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 TGFBR1P36897 503 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 ETV5P41161 510 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 ETV1P50549 477 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 COPZ1P61923 177 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 PSPHP78330 225 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 SKP2Q13309 424 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 CD226Q15762 336 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 HLA-DQA1Q5Y7H0 255 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 PAQR6Q6TCH4 344 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 THSD4Q6ZMP0 1018 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 GDPGP1Q6ZNW5 385 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 ZBTB46Q86UZ6 589 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 EID2Q8N6I1 236 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms