RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 FRKP42685 505 aaPredicted RBP12.59□□□□□ -0.39
PCNX3-202ENST00000439247 RECQLP46063 649 aaPredicted RBP12.59□□□□□ -0.39
PCNX3-202ENST00000439247 FXYD6P3P58550 94 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 NTHL1P78549 312 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 KLF9Q13886 244 aaPredicted RBP12.59□□□□□ -0.39
PCNX3-202ENST00000439247 OR5M10Q6IEU7 315 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 C3P1Q6ZMU1 363 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 ZNF793Q6ZN11 406 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 ADCK2Q7Z695 626 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 OSTF1Q92882 214 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 AICDAQ9GZX7 198 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 MGAT4CQ9UBM8 478 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 FBXL2Q9UKC9 423 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 DENND4CQ5VZ89 1909 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 CENPVL1A0A0U1RR11 272 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 ARPC1BO15143 372 aaKnown RBP12.59□□□□□ -0.39
PCNX3-202ENST00000439247 LILRB5O75023 590 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 ZP3P21754 424 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 ZNF273Q14593 569 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 GDF7Q7Z4P5 450 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 OR2T33Q8NG76 320 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 TIFAQ96CG3 184 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 DERL3Q96Q80 235 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 BBS4Q96RK4 519 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 SHARPINQ9H0F6 387 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 SLC38A1Q9H2H9 487 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 TM7SF3Q9NS93 570 aa12.59□□□□□ -0.39
PCNX3-202ENST00000439247 C4orf51C9J302 202 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 MID1O15344 667 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 POP7O75817 140 aaKnown RBP12.58□□□□□ -0.4
PCNX3-202ENST00000439247 SIX6O95475 246 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 GAAP10253 952 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 IL9P15248 144 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 ANXA7P20073 488 aaKnown RBP12.58□□□□□ -0.4
PCNX3-202ENST00000439247 RAB3BP20337 219 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 PYCR1P32322 319 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 ERVK-21P61565 698 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 STK11Q15831 433 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 NIPAL3Q6P499 406 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 FAM198BQ6UWH4 519 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 LINGO2Q7L985 606 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 ARL14Q8N4G2 192 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 LINC00471Q8N535 108 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 SUN3Q8TAQ9 357 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 GHSRQ92847 366 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 ZCCHC2Q9C0B9 1178 aaKnown RBP12.58□□□□□ -0.4
PCNX3-202ENST00000439247 SLC7A5P2Q9GIP4 190 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 WDR26Q9H7D7 661 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 TRIM36Q9NQ86 728 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 C20orf141Q9NUB4 165 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 PIPOXQ9P0Z9 390 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 KLK11Q9UBX7 282 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 SLC13A4Q9UKG4 626 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 SLC7A7Q9UM01 511 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 HNRNPCL2B2RXH8 293 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 LEFTY2O00292 366 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 OLFM2O95897 454 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 NMBP08949 121 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 STPG1Q5TH74 334 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 CDC73Q6P1J9 531 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 LRFN4Q6PJG9 635 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 C17orf107Q6ZR85 190 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 HTR3DQ70Z44 454 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 C12orf76Q8N812 135 aaPredicted RBP12.58□□□□□ -0.4
PCNX3-202ENST00000439247 OR52B4Q8NGK2 314 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 OR56B4Q8NH76 319 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 PFN4Q8NHR9 129 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 KISS1RQ969F8 398 aaPredicted RBP12.58□□□□□ -0.4
PCNX3-202ENST00000439247 MCHR1Q99705 422 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 FAM83CQ9BQN1 747 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 HCFC2Q9Y5Z7 792 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 SPTBP11277 2137 aa12.58□□□□□ -0.4
PCNX3-202ENST00000439247 CDHR4A6H8M9 788 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 LRRN3E7EW58 273 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 NDUFS4O43181 175 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 IFNGR2P38484 337 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 MMP15P51511 669 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 CLDN12P56749 244 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 RGS8P57771 180 aaPredicted RBP12.57□□□□□ -0.4
PCNX3-202ENST00000439247 UBE2MP61081 183 aaKnown RBP12.57□□□□□ -0.4
PCNX3-202ENST00000439247 ST3GAL3Q11203 375 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 RGS7BPQ6MZT1 257 aaPredicted RBP12.57□□□□□ -0.4
PCNX3-202ENST00000439247 C17orf64Q86WR6 236 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 LGALS14Q8TCE9 139 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 PTP4A1Q93096 173 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 CNRIP1Q96F85 164 aaPredicted RBP12.57□□□□□ -0.4
PCNX3-202ENST00000439247 PEX11GQ96HA9 241 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 PGLYRP3Q96LB9 341 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 PINK1Q9BXM7 581 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 LRRN3Q9H3W5 708 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 SLC35C2Q9NQQ7 365 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 PTTG3PQ9NZH4 202 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 ZNF69Q9UC07 566 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 ATG2AQ2TAZ0 1938 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 OBSL1O75147 1896 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 L7N2F9 121 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 UBL3O95164 117 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 NDUFV2P19404 249 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 KHKP50053 298 aa12.57□□□□□ -0.4
PCNX3-202ENST00000439247 TP53I3Q53FA7 332 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms