RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 SLC1A6P48664 564 aa16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 RPL14P50914 215 aaKnown RBP16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 QPRTQ15274 297 aa16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 ANXA8L1Q5VT79 327 aa16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 C22orf34Q6ZV56 151 aa16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 STEAP2Q8NFT2 490 aa16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 OR8J2Q8NGG1 315 aa16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 POM121Q96HA1 1249 aa16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 MARK4Q96L34 752 aa16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 SRXN1Q9BYN0 137 aa16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 OR10A4Q9H209 315 aa16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 ZNF395Q9H8N7 513 aaPredicted RBP16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 KCNK9Q9NPC2 374 aa16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 KLHL13Q9P2N7 655 aa16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 VPS13CQ709C8 3753 aa16.46■□□□□ 0.23
AC004540.1-201ENST00000439120 FLNAP21333 2647 aaKnown RBP16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 CPSF4O95639 269 aaKnown RBP16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 CSTAP01040 98 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 INHBBP09529 407 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 PSMB1P20618 241 aaKnown RBP16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 ARHGAP11BQ3KRB8 267 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 C3orf33Q6P1S2 294 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 PLEKHM3Q6ZWE6 761 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 ANKRD46Q86W74 232 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 TUSC5Q8IXB3 177 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 SLC43A2Q8N370 569 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 ARSGQ96EG1 525 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 PERPQ96FX8 193 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 PAIP2Q9BPZ3 127 aaKnown RBP16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 TACO1Q9BSH4 297 aaKnown RBP16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 HDHD5Q9BXW7 423 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 PARD6BQ9BYG5 372 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 OR51I1Q9H343 314 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 SERHL2Q9H4I8 314 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 GP6Q9HCN6 339 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 SERINC1Q9NRX5 453 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 MKLN1Q9UL63 735 aa16.45■□□□□ 0.22
AC004540.1-201ENST00000439120 PRSS51A0A1B0GVH4 220 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 EFNA2O43921 213 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 YES1P07947 543 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 LBPP18428 481 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 UQCRC2P22695 453 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 IL32P24001 234 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 CHI3L1P36222 383 aaPredicted RBP16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 CLNS1AP54105 237 aaKnown RBP16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 CASP9P55211 416 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 HPCAP84074 193 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 STX3Q13277 289 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 ZNF141Q15928 474 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 KRTAP21-3Q3LHN1 58 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 CEP85LQ5SZL2 805 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 ZNF704Q6ZNC4 412 aaPredicted RBP16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 EIF3MQ7L2H7 374 aaKnown RBP16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 KRTAP1-3Q8IUG1 177 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 XAGE5Q8WWM1 108 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 TMEM234Q8WY98 164 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 PLPPR2Q96GM1 343 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 OR5B2Q96R09 309 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 THUMPD3Q9BV44 507 aaKnown RBP16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 NUF2Q9BZD4 464 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 LAT2Q9GZY6 243 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 COQ10BQ9H8M1 238 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 KLHL9Q9P2J3 617 aa16.44■□□□□ 0.22
AC004540.1-201ENST00000439120 ACANP16112 2415 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 IGHV3-15A0A0B4J1V0 119 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 A0A1W2PNR3 127 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 KLF4O43474 513 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 FCMRO60667 390 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 NTN1O95631 604 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 UBTFL6P0CB48 400 aaPredicted RBP16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 OR12D1P0DN82 309 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 PGCP20142 388 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 BGNP21810 368 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 LOXP28300 417 aaPredicted RBP16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 KHKP50053 298 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 RAC3P60763 192 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 SKP2Q13309 424 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 DPY19L1Q2PZI1 675 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 TIGD2Q4W5G0 525 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 SLC25A53Q5H9E4 307 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 TNFAIP8L2Q6P589 184 aaPredicted RBP16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 TFAP2EQ6VUC0 442 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 NUFIP2Q7Z417 695 aaKnown RBP16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 YTHDF3Q7Z739 585 aaKnown RBP16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 TMEM171Q8WVE6 324 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 ST8SIA1Q92185 356 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 TESCQ96BS2 214 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 S100PBPQ96BU1 408 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 ZNF350Q9GZX5 532 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 NGBQ9NPG2 151 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 WDR45Q9Y484 360 aa16.43■□□□□ 0.22
AC004540.1-201ENST00000439120 DSCAMO60469 2012 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 FAM171A2A8MVW0 826 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 UGT2B17O75795 530 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 DHRS4L1P0CG22 281 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 ENPP1P22413 925 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 MERTKQ12866 999 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 HHATQ5VTY9 493 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 CLEC9AQ6UXN8 241 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms