RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 KHKP50053 298 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 SUMO3P55854 103 aaPredicted RBP12.38□□□□□ -0.43
PRAME-209ENST00000439106 PLAURQ03405 335 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 QPRTQ15274 297 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 ZNF141Q15928 474 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 TMEM176BQ3YBM2 270 aaPredicted RBP12.38□□□□□ -0.43
PRAME-209ENST00000439106 ATG16L1Q676U5 607 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 ANKRD34AQ69YU3 496 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 FRRS1Q6ZNA5 592 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 C22orf34Q6ZV56 151 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 RNF130Q86XS8 419 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 ANKFN1Q8N957 763 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 VPS37AQ8NEZ2 397 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 MIPOL1Q8TD10 442 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 ABHD3Q8WU67 409 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 OSTF1Q92882 214 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 ZG16BQ96DA0 208 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 NEURL3Q96EH8 262 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 DNAJA3Q96EY1 480 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 ZC3HAV1LQ96H79 300 aaKnown RBP12.38□□□□□ -0.43
PRAME-209ENST00000439106 CCDC115Q96NT0 180 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 DACH2Q96NX9 599 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 WFIKKN1Q96NZ8 548 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 OR52E6Q96RD3 313 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 PANX1Q96RD7 426 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 THUMPD3Q9BV44 507 aaKnown RBP12.38□□□□□ -0.43
PRAME-209ENST00000439106 NMUR2Q9GZQ4 415 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 C12orf49Q9H741 205 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 SLC6A13Q9NSD5 602 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 STOML1Q9UBI4 398 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 BTNL2Q9UIR0 455 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 WDR45Q9Y484 360 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 TESMINQ9Y4I5 508 aa12.38□□□□□ -0.43
PRAME-209ENST00000439106 CCDC154A6NI56 674 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 HMGN4O00479 90 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 SS18L1O75177 396 aaPredicted RBP12.37□□□□□ -0.43
PRAME-209ENST00000439106 NTN1O95631 604 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 AK1P00568 194 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 CSTAP01040 98 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 CD8BP10966 210 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 KLK2P20151 261 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 ELK4P28324 431 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 EIF1P41567 113 aaKnown RBP12.37□□□□□ -0.43
PRAME-209ENST00000439106 SLC18A1P54219 525 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 CTBP2P56545 445 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 SYPL1Q16563 259 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 ZNF239Q16600 458 aaKnown RBP12.37□□□□□ -0.43
PRAME-209ENST00000439106 GTDC1Q4AE62 458 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 TIGD2Q4W5G0 525 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 GPAT3Q53EU6 434 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 TTMPQ5BVD1 217 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 COX20Q5RI15 118 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 ATAD3BQ5T9A4 648 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 SPATA19Q7Z5L4 167 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 TOR1AIP2Q8NFQ8 470 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 OR9I1Q8NGQ6 314 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 OR5W2Q8NH69 310 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 ZFP90Q8TF47 636 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 ZNF75CPQ92670 426 aaPredicted RBP12.37□□□□□ -0.43
PRAME-209ENST00000439106 ROPN1LQ96C74 230 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 GMPPAQ96IJ6 420 aaPredicted RBP12.37□□□□□ -0.43
PRAME-209ENST00000439106 MAELQ96JY0 434 aaKnown RBP12.37□□□□□ -0.43
PRAME-209ENST00000439106 KLHL4Q9C0H6 718 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 HHATLQ9HCP6 504 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 EXD2Q9NVH0 621 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 EMC9Q9Y3B6 208 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 GPC6Q9Y625 555 aaPredicted RBP12.37□□□□□ -0.43
PRAME-209ENST00000439106 CADP27708 2225 aa12.37□□□□□ -0.43
PRAME-209ENST00000439106 EIF4E2O60573 245 aaKnown RBP12.36□□□□□ -0.43
PRAME-209ENST00000439106 DIAPH2O60879 1101 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 ADAM11O75078 769 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 SOX30O94993 753 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 H6PDO95479 791 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 CHRM4P08173 479 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 NID1P14543 1247 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 AGTR1P30556 359 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 RYKP34925 604 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 UGT2B10P36537 528 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 CARD18P57730 90 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 EEF1A1P68104 462 aaKnown RBP12.36□□□□□ -0.43
PRAME-209ENST00000439106 CHRNEQ04844 493 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 CBFBQ13951 182 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 FGFBP1Q14512 234 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 PDSS1Q5T2R2 415 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 AGBL2Q5U5Z8 902 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 EEF1A1P5Q5VTE0 462 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 PAMR1Q6UXH9 720 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 ZNF621Q6ZSS3 439 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 ZNF619Q8N2I2 560 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 OR6K3Q8NGY3 331 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 RAB3IL1Q8TBN0 382 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 PIWIL2Q8TC59 973 aaKnown RBP12.36□□□□□ -0.43
PRAME-209ENST00000439106 MRGPRX4Q96LA9 322 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 ZBTB18Q99592 522 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 MED18Q9BUE0 208 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 LAT2Q9GZY6 243 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 PLEKHF2Q9H8W4 249 aa12.36□□□□□ -0.43
PRAME-209ENST00000439106 SETD2Q9BYW2 2564 aaPredicted RBP12.35□□□□□ -0.43
PRAME-209ENST00000439106 CASKO14936 926 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 ENPP1P22413 925 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms