RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CDH11P55287 796 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 WNT4P56705 351 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 ARHGAP11BQ3KRB8 267 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 GLYR1Q49A26 553 aaPredicted RBP12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 KLHL22Q53GT1 634 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 ZNF628Q5EBL2 1059 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 LYSMD4Q5XG99 296 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 FIGNL1Q6PIW4 674 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 HSDL2Q6YN16 418 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 USP53Q70EK8 1073 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 ELMOD2Q8IZ81 293 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 SAMD14Q8IZD0 417 aaPredicted RBP12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 SLC25A45Q8N413 288 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 BBS1Q8NFJ9 593 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 OR4F15Q8NGB8 312 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 OR4M1Q8NGD0 313 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 OR5H6Q8NGV6 325 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 SUN5Q8TC36 379 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 LRIT1Q9P2V4 623 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 MALT1Q9UDY8 824 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 CSNK1G3Q9Y6M4 447 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 SYNDIG1LA6NDD5 238 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 TMCC2O75069 709 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 RDH16O75452 317 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 FPR3P25089 353 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 PI4KAP42356 2102 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 RAB40BQ12829 278 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 HNRNPA0Q13151 305 aaKnown RBP12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 DECR1Q16698 335 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 C3orf38Q5JPI3 329 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 SYT14Q8NB59 555 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 OR9A4Q8NGU2 314 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 TCTN2Q96GX1 697 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 DIRAS2Q96HU8 199 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 TM9SF2Q99805 663 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 RBCK1Q9BYM8 510 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 TXNL4BQ9NX01 149 aaKnown RBP12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 PTGFRNQ9P2B2 879 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 CLCA2Q9UQC9 943 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 CMAHPQ9Y471 501 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 ASXL3Q9C0F0 2248 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 MUC3AQ02505 3323 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 FABP12A6NFH5 140 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 FAM183AA6NL82 134 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 C12orf71A8MTZ7 269 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 MSL3P1P0C860 447 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 HOXA6P31267 233 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 ZNF136P52737 540 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 RPS25P62851 125 aaKnown RBP12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 SCN1BQ07699 218 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 MINDY4Q4G0A6 757 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 DCST2Q5T1A1 773 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 MRPL2Q5T653 305 aaKnown RBP12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 RNLSQ5VYX0 342 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 B3GLCTQ6Y288 498 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 ZNF620Q6ZNG0 422 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 LAPTM4BQ86VI4 370 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 CA13Q8N1Q1 262 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 ARHGEF39Q8N4T4 335 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 COX18Q8N8Q8 333 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 SOHLH2Q9NX45 425 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 C19orf53Q9UNZ5 99 aaPredicted RBP12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 CLCA3PQ9Y6N3 262 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 SPACA6W5XKT8 324 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 ARID1BQ8NFD5 2236 aaPredicted RBP12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 IGHV5-51A0A0C4DH38 117 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 CCDC163A0A0D9SF12 145 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 SNTNA6NMZ2 147 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 SURF4O15260 269 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 ZNF780AO75290 641 aaPredicted RBP12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 AGR2O95994 175 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 CT62P0C5K7 136 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 MYF5P13349 255 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 CPEP16870 476 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 APEX1P27695 318 aaKnown RBP12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 MLLT3P42568 568 aaPredicted RBP12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 EEF1A1P68104 462 aaKnown RBP12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 BNC1Q01954 994 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 FAPQ12884 760 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 PRTGQ2VWP7 1150 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 WDR88Q6ZMY6 472 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 MBOAT2Q6ZWT7 520 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 MRGPREQ86SM8 312 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 SLC35F3Q8IY50 421 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 RDH10Q8IZV5 341 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 VWA5B2Q8N398 1253 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 NR4A3Q92570 626 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 OSTF1Q92882 214 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 C1GALT1C1Q96EU7 318 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 SAMD8Q96LT4 415 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 FRMD6Q96NE9 622 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 DPH1Q9BZG8 443 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 ZNF350Q9GZX5 532 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 SLC22A4Q9H015 551 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 ANKRD19PQ9H560 264 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 RNF121Q9H920 327 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 ERVMER34-1Q9H9K5 563 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 IL20Q9NYY1 176 aa12.84□□□□□ -0.35
PTCHD3-201ENST00000438700 KCNE5Q9UJ90 142 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms