RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 TMEM160Q9NX00 188 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 PSME2Q9UL46 239 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 AP4B1Q9Y6B7 739 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 ZNF780BQ9Y6R6 833 aa12.56□□□□□ -0.4
LINC01088-201ENST00000437737 FAM234BA2RU67 622 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 PCDH7O60245 1069 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 SS18L1O75177 396 aaPredicted RBP12.55□□□□□ -0.4
LINC01088-201ENST00000437737 NME6O75414 186 aaPredicted RBP12.55□□□□□ -0.4
LINC01088-201ENST00000437737 ANXA4P09525 319 aaPredicted RBP12.55□□□□□ -0.4
LINC01088-201ENST00000437737 ALDOCP09972 364 aaKnown RBP12.55□□□□□ -0.4
LINC01088-201ENST00000437737 CT45A8P0DMV1 189 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 CT45A9P0DMV2 189 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 G6PDP11413 515 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 BCKDHAP12694 445 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 PSMB1P20618 241 aaKnown RBP12.55□□□□□ -0.4
LINC01088-201ENST00000437737 IL11P20809 199 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 CALB2P22676 271 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 NUDT6P53370 316 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 CLDN8P56748 225 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 PSPHP78330 225 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 RUNX1T1Q06455 604 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 CYLC2Q14093 348 aaPredicted RBP12.55□□□□□ -0.4
LINC01088-201ENST00000437737 NRF1Q16656 503 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 PGGHGQ32M88 737 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 CT45A2Q5DJT8 189 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 COMMD6Q7Z4G1 85 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 KBTBD8Q8NFY9 601 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 RNF138Q8WVD3 245 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 NSL1Q96IY1 281 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 TNFRSF13CQ96RJ3 184 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 TRAF4Q9BUZ4 470 aaPredicted RBP12.55□□□□□ -0.4
LINC01088-201ENST00000437737 C1orf50Q9BV19 199 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 DPY30Q9C005 99 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 ANKRA2Q9H9E1 313 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 ARMCX1Q9P291 453 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 MCTS1Q9ULC4 181 aaKnown RBP12.55□□□□□ -0.4
LINC01088-201ENST00000437737 OR10H1Q9Y4A9 318 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 POLR3HQ9Y535 204 aaPredicted RBP12.55□□□□□ -0.4
LINC01088-201ENST00000437737 SNX8Q9Y5X2 465 aa12.55□□□□□ -0.4
LINC01088-201ENST00000437737 THBS1P07996 1170 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 ZNF16P17020 682 aaPredicted RBP12.54□□□□□ -0.4
LINC01088-201ENST00000437737 SRD5A1P18405 259 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 THBS2P35442 1172 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 C21orf58P58505 322 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 VLDLRP98155 873 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 ZNF763Q0D2J5 394 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 DPY19L1Q2PZI1 675 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 AGKQ53H12 422 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 ZNF628Q5EBL2 1059 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 CLEC2AQ6UVW9 174 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 NPSR1Q6W5P4 371 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 IKBIPQ70UQ0 350 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 R3HCC1LQ7Z5L2 792 aaKnown RBP12.54□□□□□ -0.4
LINC01088-201ENST00000437737 SLC44A2Q8IWA5 706 aaPredicted RBP12.54□□□□□ -0.4
LINC01088-201ENST00000437737 ZNF619Q8N2I2 560 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 OR4N2Q8NGD1 307 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 C1GALT1C1Q96EU7 318 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 CNRIP1Q96F85 164 aaPredicted RBP12.54□□□□□ -0.4
LINC01088-201ENST00000437737 FAIM2Q9BWQ8 316 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 FAIMQ9NVQ4 179 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 STOML1Q9UBI4 398 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 GIMAP2Q9UG22 337 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 TAGLN3Q9UI15 199 aa12.54□□□□□ -0.4
LINC01088-201ENST00000437737 BBIP1A8MTZ0 92 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 SHISA8B8ZZ34 492 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 GMFGO60234 142 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 SYNGR4O95473 234 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 IL6P05231 212 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 SDC1P18827 310 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 IL32P24001 234 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 BNIP1Q12981 228 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 HEPACAMQ14CZ8 416 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 TSC22D1Q15714 1073 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 TAB1Q15750 504 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC01088-201ENST00000437737 FAM219BQ5XKK7 198 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 FIGNL1Q6PIW4 674 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 ZNF771Q7L3S4 317 aaPredicted RBP12.53□□□□□ -0.4
LINC01088-201ENST00000437737 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.53□□□□□ -0.4
LINC01088-201ENST00000437737 GGNQ86UU5 652 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 CCDC116Q8IYX3 515 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 NATD1Q8N6N6 113 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 OR10D3Q8NH80 312 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 ZNF675Q8TD23 568 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 KAT2AQ92830 837 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 MTERF3Q96E29 417 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 ADAD1Q96M93 576 aaKnown RBP12.53□□□□□ -0.4
LINC01088-201ENST00000437737 VSTM2LQ96N03 204 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 HDHD5Q9BXW7 423 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 MYNNQ9NPC7 610 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 GLRX2Q9NS18 164 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 CCDC167Q9P0B6 97 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 UTS2RQ9UKP6 389 aa12.53□□□□□ -0.4
LINC01088-201ENST00000437737 A0A096LNT2 108 aa12.52□□□□□ -0.41
LINC01088-201ENST00000437737 UBOX5O94941 541 aa12.52□□□□□ -0.41
LINC01088-201ENST00000437737 CD8AP01732 235 aa12.52□□□□□ -0.41
LINC01088-201ENST00000437737 COX4I1P13073 169 aa12.52□□□□□ -0.41
LINC01088-201ENST00000437737 HPCAL1P37235 193 aa12.52□□□□□ -0.41
LINC01088-201ENST00000437737 CLK3P49761 638 aaKnown RBP12.52□□□□□ -0.41
LINC01088-201ENST00000437737 POLR2JP52435 117 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms