RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 YIPF6Q96EC8 236 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 DPH1Q9BZG8 443 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 ULBP3Q9BZM4 244 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 TBCCD1Q9NVR7 557 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 SELENONQ9NZV5 590 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 C17orf51A8MQB3 221 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 RFPL3O75679 317 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 C21orf33P30042 268 aaPredicted RBP19.39■□□□□ 0.69
PTPRF-207ENST00000436724 DCAF7P61962 342 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 CDK5Q00535 292 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 ALG10BQ5I7T1 473 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 RASSF6Q6ZTQ3 369 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 CMIPQ8IY22 773 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 ZNF441Q8N8Z8 693 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 B3GNT7Q8NFL0 401 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 PHOSPHO1Q8TCT1 267 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 GGHQ92820 318 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 WDR77Q9BQA1 342 aaPredicted RBP19.39■□□□□ 0.69
PTPRF-207ENST00000436724 MEPEQ9NQ76 525 aaPredicted RBP19.39■□□□□ 0.69
PTPRF-207ENST00000436724 PSORS1C1Q9UIG5 152 aa19.39■□□□□ 0.69
PTPRF-207ENST00000436724 ZNF318Q5VUA4 2279 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 SAGE2PA6NJ88 616 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 SCDO00767 359 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 GNB5O14775 395 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 RGS10O43665 173 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 GABARAPO95166 117 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 MAKP20794 623 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 ABCD3P28288 659 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 RNF4P78317 190 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 PLCXD2Q0VAA5 305 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 SYT6Q5T7P8 510 aaPredicted RBP19.38■□□□□ 0.69
PTPRF-207ENST00000436724 FNDC7Q5VTL7 733 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 C16orf87Q6PH81 154 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 PAPD4Q6PIY7 484 aaKnown RBP19.38■□□□□ 0.69
PTPRF-207ENST00000436724 ZNF550Q7Z398 422 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 SLCO6A1Q86UG4 719 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 LSMEM1Q8N8F7 131 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 KLHDC3Q9BQ90 382 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 COPS4Q9BT78 406 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 TRIM2Q9C040 744 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 FBXO8Q9NRD0 319 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 SLC39A1Q9NY26 324 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 DNAJC27Q9NZQ0 273 aa19.38■□□□□ 0.69
PTPRF-207ENST00000436724 PMS2P1A4D2B8 440 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 CHP2O43745 196 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 PRKYO43930 277 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 FADS2O95864 444 aaKnown RBP19.37■□□□□ 0.69
PTPRF-207ENST00000436724 IFI30P13284 250 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 IL12BP29460 328 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 CCDC81Q6ZN84 652 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 NAXDQ8IW45 347 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 ZNF527Q8NB42 609 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 TEX47Q8TBZ9 253 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 OMA1Q96E52 524 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 SLC26A1Q9H2B4 701 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 PLCXD1Q9NUJ7 323 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 CARD8Q9Y2G2 431 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 OR6C76A6NM76 312 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 CLCA1A8K7I4 914 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 ENTPD6O75354 484 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 NGFRP08138 427 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 ZNF12P17014 697 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 SNRNP27Q8WVK2 155 aaKnown RBP19.37■□□□□ 0.69
PTPRF-207ENST00000436724 MR1Q95460 341 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 PPP1R14BQ96C90 147 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 SIGLEC11Q96RL6 698 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 HOXD1Q9GZZ0 328 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 PALMDQ9NP74 551 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 MRTO4Q9UKD2 239 aaKnown RBP19.37■□□□□ 0.69
PTPRF-207ENST00000436724 SLC35A3Q9Y2D2 325 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 B3GALT1Q9Y5Z6 326 aa19.37■□□□□ 0.69
PTPRF-207ENST00000436724 TLX2O43763 284 aaPredicted RBP19.36■□□□□ 0.69
PTPRF-207ENST00000436724 GMFGO60234 142 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 MPZL2O60487 215 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 TSPAN2O60636 221 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 OPRL1P41146 370 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 ETV5P41161 510 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 CCR4P51679 360 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 CSNK2BP67870 215 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 SLC30A6Q6NXT4 461 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 SLC27A4Q6P1M0 643 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 ZNF620Q6ZNG0 422 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 DCDC5Q6ZRR9 648 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 CACTIN-AS1Q8N1I8 211 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 FAM71CQ8NEG0 241 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 SH3YL1Q96HL8 342 aaPredicted RBP19.36■□□□□ 0.69
PTPRF-207ENST00000436724 COX4I2Q96KJ9 171 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 CMKLR1Q99788 373 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 SEMA4CQ9C0C4 833 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 CLN6Q9NWW5 311 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 TO15178 435 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 ZNF354AO60765 605 aaPredicted RBP19.36■□□□□ 0.69
PTPRF-207ENST00000436724 CH25HO95992 272 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 KLK3P07288 261 aaPredicted RBP19.36■□□□□ 0.69
PTPRF-207ENST00000436724 ZNF806P0C7X5 589 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 UBL4AP11441 157 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 TBXA2RP21731 343 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 CCKBRP32239 447 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 SMSP52788 366 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 SNRPGP62308 76 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms