RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 CDC20Q12834 499 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 PIN1Q13526 163 aaPredicted RBP6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 EFR3AQ14156 821 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 NTRK2Q16620 822 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 NRF1Q16656 503 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 NDUFAF6Q330K2 333 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 ACER2Q5QJU3 275 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 LCE2AQ5TA79 106 aaPredicted RBP6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 OPN5Q6U736 354 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 AMIGO2Q86SJ2 522 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 MARCH3Q86UD3 253 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 TSPYL5Q86VY4 417 aaPredicted RBP6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 GRAMD2AQ8IUY3 354 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 CCDC103Q8IW40 242 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 CMIPQ8IY22 773 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 GATSQ8NAP1 163 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 ZNF527Q8NB42 609 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 POGLUT1Q8NBL1 392 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 OR10G3Q8NGC4 313 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 OR6T1Q8NGN1 323 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 GRHL3Q8TE85 626 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 PHF10Q8WUB8 498 aaKnown RBP6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 NRG4Q8WWG1 115 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 NTNG2Q96CW9 530 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 SPACA9Q96E40 222 aaPredicted RBP6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 ZNF300Q96RE9 604 aaPredicted RBP6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 CCNL2Q96S94 520 aaPredicted RBP6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 DPH1Q9BZG8 443 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 LHPPQ9H008 270 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 SEMA6AQ9H2E6 1030 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 TRIM45Q9H8W5 580 aaPredicted RBP6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 CACYBPQ9HB71 228 aaKnown RBP6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 SH2D2AQ9NP31 389 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 VNN3Q9NY84 501 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 C6orf203Q9P0P8 240 aaPredicted RBP6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 DNAJB9Q9UBS3 223 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 DKK4Q9UBT3 224 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 TMEFF2Q9UIK5 374 aaPredicted RBP6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 NTNG1Q9Y2I2 539 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 ENPP4Q9Y6X5 453 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 FER1L5A0AVI2 2057 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 PCNX2A6NKB5 2137 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 C17orf51A8MQB3 221 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 SCDO00767 359 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 CASQ2O14958 399 aaPredicted RBP6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 SCO2O43819 266 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 HS6ST1O60243 411 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 DPM1O60762 260 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 CST1P01037 141 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 CSTAP01040 98 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 LDLRP01130 860 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 GKN3PP0CG01 181 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 SPTBP11277 2137 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 FCGR1AP12314 374 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 HPGDP15428 266 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 ITGA3P26006 1051 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 COL8A1P27658 744 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 EVI2BP34910 448 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 GCKP35557 465 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 EIF2S3P41091 472 aaKnown RBP6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 PTGDSP41222 190 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 ACAA2P42765 397 aaKnown RBP6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 IST1P53990 364 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 GAS1P54826 345 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 SKP2Q13309 424 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 MEP1AQ16819 746 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 ZSWIM7Q19AV6 140 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 EIPR1Q53HC9 387 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 LPCAT4Q643R3 524 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 BICRALQ6AI39 1079 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 OR2T5Q6IEZ7 315 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 CBLN3Q6UW01 205 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 IL20RBQ6UXL0 311 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 DEF8Q6ZN54 512 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 TMEM179BQ7Z7N9 219 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 ZNF605Q86T29 641 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 ZBTB46Q86UZ6 589 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 BEST3Q8N1M1 668 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 GALNT16Q8N428 558 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 ZNF614Q8N883 585 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 CLEC1AQ8NC01 280 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 FAM71CQ8NEG0 241 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 OR2T29Q8NH02 315 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 ASB15Q8WXK1 588 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 ZNF524Q96C55 264 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 TMCO6Q96DC7 493 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 ARSGQ96EG1 525 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 CENPNQ96H22 339 aaPredicted RBP6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 ZNF347Q96SE7 839 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 SMAD5Q99717 465 aaKnown RBP6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 BARD1Q99728 777 aaKnown RBP6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 PIP5K1AQ99755 562 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 KLHDC3Q9BQ90 382 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 ING2Q9H160 280 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 ARMC7Q9H6L4 198 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 YY1AP1Q9H869 796 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 ANKRD10Q9NXR5 420 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 KLHL28Q9NXS3 571 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 STMN3Q9NZ72 180 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 RHCGQ9UBD6 479 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms