RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ZNF623O75123 536 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 RAB3DO95716 219 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 SLC35E2BP0CK96 405 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 SLURP2P0DP57 97 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 SELEP16581 610 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 INHBCP55103 352 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 LPCAT3Q6P1A2 487 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 GDPD3Q7L5L3 318 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 AAED1Q7RTV5 226 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 SORCS2Q96PQ0 1159 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 ABCG5Q9H222 651 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 SOX17Q9H6I2 414 aaPredicted RBP10.53□□□□□ -0.72
SCN4A-201ENST00000435607 KCMF1Q9P0J7 381 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 SGSHP51688 502 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 MBTPS1Q14703 1052 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 FXNQ16595 210 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 TMEM25Q86YD3 366 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 OR5D16Q8NGK9 328 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 MYLIPQ8WY64 445 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 PRRC1Q96M27 445 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 VN1R3Q9BXE9 311 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 SLC17A6Q9P2U8 582 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 DUSP13Q9UII6 198 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 MED16Q9Y2X0 877 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 TEX264Q9Y6I9 313 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 COL1A1P02452 1464 aaPredicted RBP10.53□□□□□ -0.72
SCN4A-201ENST00000435607 MROH2AA6NES4 1674 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 GOSR2O14653 212 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 SULT1B1O43704 296 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 FOXD2O60548 495 aaPredicted RBP10.53□□□□□ -0.72
SCN4A-201ENST00000435607 RDH16O75452 317 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 CLDN8P56748 225 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 AADACL3Q5VUY0 350 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 C14orf80Q86SX3 495 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 ZFP82Q8N141 532 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 ESX1Q8N693 406 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 PCDHGA5Q9Y5G8 931 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 NAP1L6A6NFF2 107 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 GPR171O14626 319 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 DCNP07585 359 aaKnown RBP10.52□□□□□ -0.72
SCN4A-201ENST00000435607 IL1R2P27930 398 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 HTR1EP28566 365 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 SLC18A1P54219 525 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 HSF5Q4G112 596 aaPredicted RBP10.52□□□□□ -0.72
SCN4A-201ENST00000435607 SPARTQ8N0X7 666 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 OR2A12Q8NGT7 310 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF845Q96IR2 970 aaPredicted RBP10.52□□□□□ -0.72
SCN4A-201ENST00000435607 SLC6A20Q9NP91 592 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 MYH8P13535 1937 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 DCDC2BA2VCK2 349 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 AQP9O43315 295 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 AQP2P41181 271 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 SLC14A1Q13336 389 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 HEPHL1Q6MZM0 1159 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 TCTEX1D2Q8WW35 142 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 HHLA2Q9UM44 414 aa10.52□□□□□ -0.72
SCN4A-201ENST00000435607 DENRO43583 198 aaKnown RBP10.52□□□□□ -0.73
SCN4A-201ENST00000435607 AKAIN1P0CW23 69 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 PRKACGP22612 351 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 NFYAP23511 347 aaPredicted RBP10.52□□□□□ -0.73
SCN4A-201ENST00000435607 MMP12P39900 470 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 PBX1P40424 430 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 ATP6AP1Q15904 470 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 NRMQ8IXM6 262 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 ZNF420Q8TAQ5 688 aaPredicted RBP10.52□□□□□ -0.73
SCN4A-201ENST00000435607 ISYNA1Q9NPH2 558 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 GFOD1Q9NXC2 390 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 TRAF3IP2O43734 574 aaPredicted RBP10.52□□□□□ -0.73
SCN4A-201ENST00000435607 NXPH2O95156 264 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 PXNP49023 591 aaPredicted RBP10.52□□□□□ -0.73
SCN4A-201ENST00000435607 PEA15Q15121 130 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 TBRG1Q3YBR2 411 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 VWA2Q5GFL6 755 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 PDZD3Q86UT5 571 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 GCNT2Q8N0V5 402 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 KRTCAP2Q8N6L1 136 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 C14orf119Q9NWQ9 140 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 SLCO3A1Q9UIG8 710 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 PCDHGA1Q9Y5H4 931 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 A0A0A6YYC8 382 aaPredicted RBP10.52□□□□□ -0.73
SCN4A-201ENST00000435607 PRSS38A1L453 326 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 I3L1I5 382 aaPredicted RBP10.52□□□□□ -0.73
SCN4A-201ENST00000435607 MSTNO14793 375 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 EIF1BO60739 113 aaKnown RBP10.52□□□□□ -0.73
SCN4A-201ENST00000435607 GJA5P36382 358 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 RNF4P78317 190 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 TLE4Q04727 773 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 ZNF595Q8IYB9 648 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 SUMF2Q8NBJ7 301 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 ZC3HAV1LQ96H79 300 aaKnown RBP10.52□□□□□ -0.73
SCN4A-201ENST00000435607 TMEM19Q96HH6 336 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 OR6C1Q96RD1 312 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 ADOQ96SZ5 270 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 ACSS1Q9NUB1 689 aaPredicted RBP10.52□□□□□ -0.73
SCN4A-201ENST00000435607 YARS2Q9Y2Z4 477 aaKnown RBP10.52□□□□□ -0.73
SCN4A-201ENST00000435607 HSPE1-MOB4S4R3N1 261 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 LRP5LA4QPB2 252 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 RNF225M0QZC1 329 aaPredicted RBP10.52□□□□□ -0.73
SCN4A-201ENST00000435607 TUSC2O75896 110 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 CDK4P11802 303 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms