RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 CLIC1O00299 241 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 ETV2O00321 342 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-207ENST00000435455 SYT5O00445 386 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 EEF1E1O43324 174 aaKnown RBP14.62□□□□□ -0.07
SMPD4-207ENST00000435455 DNAJA2O60884 412 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 UBTFL6P0CB48 400 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-207ENST00000435455 PRKCAP17252 672 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 PPIBP23284 216 aaKnown RBP14.62□□□□□ -0.07
SMPD4-207ENST00000435455 SSTR2P30874 369 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 PEX19P40855 299 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 EIF1AXP47813 144 aaKnown RBP14.62□□□□□ -0.07
SMPD4-207ENST00000435455 KCNJ10P78508 379 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 FADDQ13158 208 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 TOMM34Q15785 309 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-207ENST00000435455 GTDC1Q4AE62 458 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 LRIF1Q5T3J3 769 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 METTL21CQ5VZV1 264 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 PLXDC2Q6UX71 529 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 ESPNLQ6ZVH7 1005 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 GCNT2Q8N0V5 402 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 LILRA2Q8N149 483 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 FAM71CQ8NEG0 241 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 OR2V1Q8NHB1 315 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 ST8SIA1Q92185 356 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 FIG4Q92562 907 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 RNASE6Q93091 150 aaKnown RBP14.62□□□□□ -0.07
SMPD4-207ENST00000435455 ZG16BQ96DA0 208 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 THUMPD3Q9BV44 507 aaKnown RBP14.62□□□□□ -0.07
SMPD4-207ENST00000435455 PIGMQ9H3S5 423 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 SLC52A3Q9NQ40 469 aa14.62□□□□□ -0.07
SMPD4-207ENST00000435455 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 A0A1W2PNV4 684 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 GJE1A6NN92 205 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 ADAMDEC1O15204 470 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 SYNGR4O95473 234 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 NTN1O95631 604 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 DBIP07108 87 aaKnown RBP14.61□□□□□ -0.07
SMPD4-207ENST00000435455 PRF1P14222 555 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 HOXB9P17482 250 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-207ENST00000435455 CAPN3P20807 821 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 PGM1P36871 562 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 SLC6A8P48029 635 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 AGFG1P52594 562 aaKnown RBP14.61□□□□□ -0.07
SMPD4-207ENST00000435455 CRISP3P54108 245 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 FOXF2Q12947 444 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 PON3Q15166 354 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 QPRTQ15274 297 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 CTU2Q2VPK5 515 aaKnown RBP14.61□□□□□ -0.07
SMPD4-207ENST00000435455 HBMQ6B0K9 141 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 PEX5LQ8IYB4 626 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 OR10D3Q8NH80 312 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 FNDC9Q8TBE3 224 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 WDR60Q8WVS4 1066 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 TMEM234Q8WY98 164 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 C14orf79Q96F83 325 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 ADGRG7Q96K78 797 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 KLHL15Q96M94 604 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 ZNF385DQ9H6B1 395 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 TMEM185BQ9H7F4 350 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 EXOSC3Q9NQT5 275 aaKnown RBP14.61□□□□□ -0.07
SMPD4-207ENST00000435455 MRGBPQ9NV56 204 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 JKAMPQ9P055 326 aa14.61□□□□□ -0.07
SMPD4-207ENST00000435455 MCTS1Q9ULC4 181 aaKnown RBP14.61□□□□□ -0.07
SMPD4-207ENST00000435455 A0A0J9YW62 118 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 A0A1W2PP18 115 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 OPN1LWP04000 364 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 BCHEP06276 602 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 VIMP08670 466 aaKnown RBP14.6□□□□□ -0.07
SMPD4-207ENST00000435455 TFPTP0C1Z6 253 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 NID1P14543 1247 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 IL7RP16871 459 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 RPS4Y1P22090 263 aaKnown RBP14.6□□□□□ -0.07
SMPD4-207ENST00000435455 UQCRC1P31930 480 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 SFTPDP35247 375 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 DLX5P56178 289 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 SELENBP1Q13228 472 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 RGNQ15493 299 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 PAGE3Q5JUK9 113 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 KIF18BQ86Y91 864 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 ZNF295-AS1Q8N0V1 137 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 TSPEARQ8WU66 669 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 ZNF845Q96IR2 970 aaPredicted RBP14.6□□□□□ -0.07
SMPD4-207ENST00000435455 TMEM120AQ9BXJ8 343 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 PRRG4Q9BZD6 226 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 QRSL1Q9H0R6 528 aaKnown RBP14.6□□□□□ -0.07
SMPD4-207ENST00000435455 CCDC134Q9H6E4 229 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 RNF122Q9H9V4 155 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 CACYBPQ9HB71 228 aaKnown RBP14.6□□□□□ -0.07
SMPD4-207ENST00000435455 TIGARQ9NQ88 270 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 ACER3Q9NUN7 267 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 FGFR1OP2Q9NVK5 253 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 KCNN3Q9UGI6 736 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 LEF1Q9UJU2 399 aaPredicted RBP14.6□□□□□ -0.07
SMPD4-207ENST00000435455 PACSIN3Q9UKS6 424 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 FBN2P35556 2912 aa14.6□□□□□ -0.07
SMPD4-207ENST00000435455 A0A0G2JPF8 293 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 HNRNPCL2B2RXH8 293 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 HNRNPCL3B7ZW38 293 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 TNFSF11O14788 317 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 EFNA2O43921 213 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms