RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SLC37A3Q8NCC5 494 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 OR6F1Q8NGZ6 308 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 GRHL3Q8TE85 626 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 CNOT9Q92600 299 aaKnown RBP17.18■□□□□ 0.34
CLK1-205ENST00000434813 CTRCQ99895 268 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 KCNN2Q9H2S1 579 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 MOV10Q9HCE1 1003 aaKnown RBP17.18■□□□□ 0.34
CLK1-205ENST00000434813 FAM60AQ9NP50 221 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 TRIM36Q9NQ86 728 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 BAIAP2Q9UQB8 552 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 SLC35A3Q9Y2D2 325 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 SPTY2D1-AS1A0A0U1RR47 76 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 CD8B2A6NJW9 211 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 SHISA7A6NL88 538 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 GTPBP1O00178 669 aaKnown RBP17.17■□□□□ 0.34
CLK1-205ENST00000434813 CD8BP10966 210 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 ST6GAL1P15907 406 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 RBM34P42696 430 aaKnown RBP17.17■□□□□ 0.34
CLK1-205ENST00000434813 CCR5P51681 352 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 HHEXQ03014 270 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 GALEQ14376 348 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 INSL4Q14641 139 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 SMAD2Q15796 467 aaKnown RBP17.17■□□□□ 0.34
CLK1-205ENST00000434813 RSBN1Q5VWQ0 802 aaPredicted RBP17.17■□□□□ 0.34
CLK1-205ENST00000434813 CNIH2Q6PI25 160 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 ZNF438Q7Z4V0 828 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 TAF8Q7Z7C8 310 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 OR9A4Q8NGU2 314 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 RNF32Q9H0A6 362 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 C11orf54Q9H0W9 315 aaPredicted RBP17.17■□□□□ 0.34
CLK1-205ENST00000434813 PPP1R3EQ9H7J1 279 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 DNAJB12Q9NXW2 375 aaKnown RBP17.17■□□□□ 0.34
CLK1-205ENST00000434813 FLRT3Q9NZU0 649 aa17.17■□□□□ 0.34
CLK1-205ENST00000434813 TRAV27A0A087WT01 109 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 A0A1B0GWA3 101 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 PTP4A3O75365 173 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 RFPL3O75679 317 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 NCR1O76036 304 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 IGLV3-19P01714 112 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 S1PR1P21453 382 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 ZNHIT3Q15649 155 aaPredicted RBP17.16■□□□□ 0.34
CLK1-205ENST00000434813 DEFB110Q30KQ9 67 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 ZNF542PQ5EBM4 170 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 KIAA0895LQ68EN5 471 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 MZT2AQ6P582 158 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 SLC43A2Q8N370 569 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 PTP4A1Q93096 173 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 DEPDC7Q96QD5 511 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 FOLH1BQ9HBA9 442 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 ZNF221Q9UK13 617 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 LINC00854A0A1B0GVQ3 168 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 DAPL1A0PJW8 107 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 RIIAD1A6NNX1 92 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 HPGDSO60760 199 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 TRAPPC2P0DI81 140 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 TRAPPC2BP0DI82 140 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 CD53P19397 219 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 SLC2A5P22732 501 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 SSTR4P31391 388 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 MTNR1BP49286 362 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 RIN1Q13671 783 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 FZD2Q14332 565 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 KLHL12Q53G59 568 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 ARMC6Q6NXE6 501 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 Q6ZS52 159 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 RDH10Q8IZV5 341 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 C19orf47Q8N9M1 422 aaKnown RBP17.16■□□□□ 0.34
CLK1-205ENST00000434813 HLA-CQ95604 372 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 TRIM2Q9C040 744 aa17.16■□□□□ 0.34
CLK1-205ENST00000434813 SIRT4Q9Y6E7 314 aaPredicted RBP17.16■□□□□ 0.34
CLK1-205ENST00000434813 C2orf92A0A1B0GVN3 265 aa17.15■□□□□ 0.34
CLK1-205ENST00000434813 HTR3EA5X5Y0 456 aa17.15■□□□□ 0.34
CLK1-205ENST00000434813 KRT8P05787 483 aa17.15■□□□□ 0.34
CLK1-205ENST00000434813 CTSBP07858 339 aa17.15■□□□□ 0.34
CLK1-205ENST00000434813 TYRP1P17643 537 aa17.15■□□□□ 0.34
CLK1-205ENST00000434813 RFX3P48380 749 aa17.15■□□□□ 0.34
CLK1-205ENST00000434813 EMDP50402 254 aa17.15■□□□□ 0.34
CLK1-205ENST00000434813 DAB2P98082 770 aa17.15■□□□□ 0.34
CLK1-205ENST00000434813 ZNF362Q5T0B9 420 aaPredicted RBP17.15■□□□□ 0.34
CLK1-205ENST00000434813 LCN1P1Q5VSP4 162 aa17.15■□□□□ 0.34
CLK1-205ENST00000434813 ZNF614Q8N883 585 aa17.15■□□□□ 0.34
CLK1-205ENST00000434813 OR10H4Q8NGA5 316 aa17.15■□□□□ 0.34
CLK1-205ENST00000434813 SLC35B4Q969S0 331 aa17.15■□□□□ 0.34
CLK1-205ENST00000434813 ARSGQ96EG1 525 aa17.15■□□□□ 0.34
CLK1-205ENST00000434813 TEAD3Q99594 435 aa17.15■□□□□ 0.34
CLK1-205ENST00000434813 MEIOCA2RUB1 952 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 PLA2G10O15496 165 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 IGKV1D-16P01601 117 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 MT-ND5P03915 603 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 THEGLP0DJG4 465 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 IL9P15248 144 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 ZNF3P17036 446 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 APEX1P27695 318 aaKnown RBP17.14■□□□□ 0.34
CLK1-205ENST00000434813 ACAA2P42765 397 aaKnown RBP17.14■□□□□ 0.34
CLK1-205ENST00000434813 EVX1P49640 407 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 NKX2-5P52952 324 aaPredicted RBP17.14■□□□□ 0.34
CLK1-205ENST00000434813 RPS7P62081 194 aaKnown RBP17.14■□□□□ 0.34
CLK1-205ENST00000434813 PRTGQ2VWP7 1150 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 GPALPP1Q8IXQ4 340 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 LSMEM1Q8N8F7 131 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms