RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 B4DXG7 233 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 C10orf142B7Z368 130 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 NPIPA7E9PJI5 369 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 SGK494L7N484 410 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 RFXAPO00287 272 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 RGS13O14921 159 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 PLPP2O43688 288 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 HPGDSO60760 199 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 SERPINA3P01011 423 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 SBK2P0C263 348 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 NPIPA8P0DM63 369 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 PEPDP12955 493 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 RNH1P13489 461 aaKnown RBP9.64□□□□□ -0.87
CD44-210ENST00000434472 CAV3P56539 151 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 ZNF141Q15928 474 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 KIAA0895LQ68EN5 471 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 VASNQ6EMK4 673 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 TMEM53Q6P2H8 277 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 PLET1Q6UQ28 207 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 TMEM92Q6UXU6 159 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 TAF8Q7Z7C8 310 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 OAFQ86UD1 273 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 LSMEM1Q8N8F7 131 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 TEX19Q8NA77 164 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 AVL9Q8NBF6 648 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 OR10H4Q8NGA5 316 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 OR5T3Q8NGG3 340 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 OR13C2Q8NGS9 318 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 RPLP0P6Q8NHW5 317 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 FAM174AQ8TBP5 190 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 SLC37A2Q8TED4 501 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 CAPSLQ8WWF8 208 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 CNOT9Q92600 299 aaKnown RBP9.64□□□□□ -0.87
CD44-210ENST00000434472 PTP4A1Q93096 173 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 KISS1RQ969F8 398 aaPredicted RBP9.64□□□□□ -0.87
CD44-210ENST00000434472 ZNF578Q96N58 590 aaPredicted RBP9.64□□□□□ -0.87
CD44-210ENST00000434472 NECTIN4Q96NY8 510 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 G6PC3Q9BUM1 346 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 RNF32Q9H0A6 362 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 ISG20L2Q9H9L3 353 aaKnown RBP9.64□□□□□ -0.87
CD44-210ENST00000434472 C20orf141Q9NUB4 165 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 RBFOX1Q9NWB1 397 aaKnown RBP9.64□□□□□ -0.87
CD44-210ENST00000434472 USP36Q9P275 1121 aaKnown RBP9.64□□□□□ -0.87
CD44-210ENST00000434472 POMT2Q9UKY4 750 aa9.64□□□□□ -0.87
CD44-210ENST00000434472 NDRG2Q9UN36 371 aaKnown RBP9.64□□□□□ -0.87
CD44-210ENST00000434472 SMIM30A4D0T7 59 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 PLA2G10O15496 165 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 LRRTM2O43300 516 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 SRPX2O60687 465 aaPredicted RBP9.63□□□□□ -0.87
CD44-210ENST00000434472 RDH16O75452 317 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 PPM1BO75688 479 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 CTSEP14091 401 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 GABRG2P18507 467 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 SLC2A5P22732 501 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 S100A1P23297 94 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 APEX1P27695 318 aaKnown RBP9.63□□□□□ -0.87
CD44-210ENST00000434472 TALDO1P37837 337 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 MLLT3P42568 568 aaPredicted RBP9.63□□□□□ -0.87
CD44-210ENST00000434472 NR4A2P43354 598 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 BLKP51451 505 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 GPR143P51810 404 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 LGALS3BPQ08380 585 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 FZD5Q13467 585 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 TBRG1Q3YBR2 411 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 HACD4Q5VWC8 232 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 ULK3Q6PHR2 472 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 ZNF438Q7Z4V0 828 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 GATAD2AQ86YP4 633 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 ZNF595Q8IYB9 648 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 ZNF440Q8IYI8 595 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 MS4A15Q8N5U1 240 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 C19orf47Q8N9M1 422 aaKnown RBP9.63□□□□□ -0.87
CD44-210ENST00000434472 DUSP18Q8NEJ0 188 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 GRHL3Q8TE85 626 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 DOK4Q8TEW6 326 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 SMPDL3BQ92485 455 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 SLC7A6Q92536 515 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 ST6GAL2Q96JF0 529 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 CCNL2Q96S94 520 aaPredicted RBP9.63□□□□□ -0.87
CD44-210ENST00000434472 TTYH2Q9BSA4 534 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 TMEM43Q9BTV4 400 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 ZNF426Q9BUY5 554 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 MMP28Q9H239 520 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 OR51V1Q9H2C8 321 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 MED20Q9H944 212 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 MKKSQ9NPJ1 570 aaPredicted RBP9.63□□□□□ -0.87
CD44-210ENST00000434472 CD93Q9NPY3 652 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 DNAJB12Q9NXW2 375 aaKnown RBP9.63□□□□□ -0.87
CD44-210ENST00000434472 SERTAD3Q9UJW9 196 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 N6AMT1Q9Y5N5 214 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 NOX1Q9Y5S8 564 aa9.63□□□□□ -0.87
CD44-210ENST00000434472 SPTY2D1-AS1A0A0U1RR47 76 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 C2orf92A0A1B0GVN3 265 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 EFCAB7A8K855 629 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 TFECO14948 347 aaPredicted RBP9.62□□□□□ -0.87
CD44-210ENST00000434472 PRAMEF2O60811 474 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 CTNSO60931 367 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 NDUFB2O95178 105 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 PPP1R3DO95685 299 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 IGLV3-19P01714 112 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms