RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 ATP6AP1LQ52LC2 224 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 C6orf136Q5SQH8 315 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 DCST2Q5T1A1 773 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 PDSS1Q5T2R2 415 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 CBLN3Q6UW01 205 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 CLEC9AQ6UXN8 241 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ZCCHC23Q6ZST2 131 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 BEND4Q6ZU67 534 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 CIARTQ8N365 385 aaPredicted RBP8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 KRTCAP2Q8N6L1 136 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 NATD1Q8N6N6 113 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ZNF527Q8NB42 609 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 AGR3Q8TD06 166 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 SFXN5Q8TD22 340 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 TCP10LQ8TDR4 215 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 OSTF1Q92882 214 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 CPNE4Q96A23 557 aaPredicted RBP8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 TMEM204Q9BSN7 226 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 C1orf50Q9BV19 199 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 SRXN1Q9BYN0 137 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ACTR6Q9GZN1 396 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 HOXD1Q9GZZ0 328 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ANKZF1Q9H8Y5 726 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 GP6Q9HCN6 339 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ATAD3AQ9NVI7 634 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 FRRS1LQ9P0K9 344 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 SNX8Q9Y5X2 465 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 KCNE3Q9Y6H6 103 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 PRR14LQ5THK1 2151 aa8.39□□□□□ -1.07
CDC42-IT1-201ENST00000431803 UQCRHLA0A096LP55 91 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 TLDC2A0PJX2 215 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 H7C1Q1 480 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 SPAG7O75391 227 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 GCM2O75603 506 aaPredicted RBP8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 SLU7O95391 586 aaKnown RBP8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 C6orf47O95873 294 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 PABPC4LP0CB38 370 aaKnown RBP8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 PRKCAP17252 672 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 PRPS1L1P21108 318 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ATP6V1C1P21283 382 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 SFTPDP35247 375 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ETV4P43268 484 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 GATA4P43694 442 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 PTH2RP49190 550 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 P2RX1P51575 399 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 CARD18P57730 90 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 HBA1P69905 142 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 PLAURQ03405 335 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 RNPS1Q15287 305 aaKnown RBP8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 TOMM34Q15785 309 aaPredicted RBP8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 LSM12Q3MHD2 195 aaKnown RBP8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 SLC25A53Q5H9E4 307 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 IL23RQ5VWK5 629 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 GTF2IRD2BQ6EKJ0 949 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 TFAP2EQ6VUC0 442 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ZNF704Q6ZNC4 412 aaPredicted RBP8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 Q71RC1 249 aaPredicted RBP8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 YTHDF3Q7Z739 585 aaKnown RBP8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 GTF2IRD2Q86UP8 949 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 STK32CQ86UX6 486 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 GABRG1Q8N1C3 465 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 FNDC5Q8NAU1 212 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 FBXO27Q8NI29 283 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 PHOSPHO1Q8TCT1 267 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 GPR119Q8TDV5 335 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ADAMTS15Q8TE58 950 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ABHD3Q8WU67 409 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ROBO4Q8WZ75 1007 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 MOAP1Q96BY2 351 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ZNF524Q96C55 264 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 PERPQ96FX8 193 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 CHMP6Q96FZ7 201 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 MRGPRX4Q96LA9 322 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 Q96MF0 132 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 BHLHE41Q9C0J9 482 aaPredicted RBP8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 C12orf49Q9H741 205 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 COQ10BQ9H8M1 238 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 FANCFQ9NPI8 374 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 TIGARQ9NQ88 270 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ZNF701Q9NV72 531 aaPredicted RBP8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 KLHL13Q9P2N7 655 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ZDHHC2Q9UIJ5 367 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 FAF1Q9UNN5 650 aaPredicted RBP8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 CARD8Q9Y2G2 431 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 GPR52Q9Y2T5 361 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 HIVEP2P31629 2446 aa8.38□□□□□ -1.07
CDC42-IT1-201ENST00000431803 HEATR5AQ86XA9 2040 aa8.37□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ANK3Q12955 4377 aaKnown RBP8.37□□□□□ -1.07
CDC42-IT1-201ENST00000431803 USF3Q68DE3 2245 aa8.37□□□□□ -1.07
CDC42-IT1-201ENST00000431803 NPIPA5A0A0B4J1W7 369 aa8.37□□□□□ -1.07
CDC42-IT1-201ENST00000431803 TRIM64A6NGJ6 449 aa8.37□□□□□ -1.07
CDC42-IT1-201ENST00000431803 TRIM64BA6NI03 449 aa8.37□□□□□ -1.07
CDC42-IT1-201ENST00000431803 GJE1A6NN92 205 aa8.37□□□□□ -1.07
CDC42-IT1-201ENST00000431803 NPIPA7E9PJI5 369 aa8.37□□□□□ -1.07
CDC42-IT1-201ENST00000431803 H3BNH8 94 aa8.37□□□□□ -1.07
CDC42-IT1-201ENST00000431803 ZNF195O14628 629 aa8.37□□□□□ -1.07
CDC42-IT1-201ENST00000431803 TYROBPO43914 113 aa8.37□□□□□ -1.07
CDC42-IT1-201ENST00000431803 DNAJA2O60884 412 aa8.37□□□□□ -1.07
CDC42-IT1-201ENST00000431803 TMCC2O75069 709 aa8.37□□□□□ -1.07
CDC42-IT1-201ENST00000431803 SKAP2O75563 359 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms