RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 CMPK2Q5EBM0 449 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 KDM4DQ6B0I6 523 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 GDF7Q7Z4P5 450 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 MARCH3Q86UD3 253 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 GRHL3Q8TE85 626 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 SLC38A4Q969I6 547 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 NTNG1Q9Y2I2 539 aa16.68■□□□□ 0.26
HMGN1-206ENST00000431390 HEATR5AQ86XA9 2040 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 SH3PXD2BA1X283 911 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 MASP2O00187 686 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 TP53I11O14683 189 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 ADAM11O75078 769 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 UQCRBP14927 111 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 SLC6A8P48029 635 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 DAPP51397 102 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 RAD23AP54725 363 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 AIMP2Q13155 320 aaKnown RBP16.67■□□□□ 0.26
HMGN1-206ENST00000431390 TAF11Q15544 211 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 NDUFAF6Q330K2 333 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 TMEM81Q6P7N7 255 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 PODNL1Q6PEZ8 512 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 ATG16L2Q8NAA4 619 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 OR5M3Q8NGP4 307 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 ASB15Q8WXK1 588 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 SECISBP2Q96T21 854 aaKnown RBP16.67■□□□□ 0.26
HMGN1-206ENST00000431390 RTN4RQ9BZR6 473 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 HHATLQ9HCP6 504 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 ATP13A2Q9NQ11 1180 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 KIF17Q9P2E2 1029 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 TMEFF2Q9UIK5 374 aaPredicted RBP16.67■□□□□ 0.26
HMGN1-206ENST00000431390 CARD8Q9Y2G2 431 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 ORC6Q9Y5N6 252 aa16.67■□□□□ 0.26
HMGN1-206ENST00000431390 ADAM10O14672 748 aa16.66■□□□□ 0.26
HMGN1-206ENST00000431390 THY1P04216 161 aa16.66■□□□□ 0.26
HMGN1-206ENST00000431390 IGFBP5P24593 272 aa16.66■□□□□ 0.26
HMGN1-206ENST00000431390 RPP38P78345 283 aaKnown RBP16.66■□□□□ 0.26
HMGN1-206ENST00000431390 SEC23BQ15437 767 aa16.66■□□□□ 0.26
HMGN1-206ENST00000431390 MEP1AQ16819 746 aa16.66■□□□□ 0.26
HMGN1-206ENST00000431390 NHSL2Q5HYW2 709 aa16.66■□□□□ 0.26
HMGN1-206ENST00000431390 FCRLBQ6BAA4 426 aa16.66■□□□□ 0.26
HMGN1-206ENST00000431390 ZNF770Q6IQ21 691 aaPredicted RBP16.66■□□□□ 0.26
HMGN1-206ENST00000431390 VASH2Q86V25 355 aa16.66■□□□□ 0.26
HMGN1-206ENST00000431390 OR10G3Q8NGC4 313 aa16.66■□□□□ 0.26
HMGN1-206ENST00000431390 BRIX1Q8TDN6 353 aaKnown RBP16.66■□□□□ 0.26
HMGN1-206ENST00000431390 THAP4Q8WY91 577 aa16.66■□□□□ 0.26
HMGN1-206ENST00000431390 THOC3Q96J01 351 aaKnown RBP16.66■□□□□ 0.26
HMGN1-206ENST00000431390 FEVQ99581 238 aa16.66■□□□□ 0.26
HMGN1-206ENST00000431390 DPH1Q9BZG8 443 aa16.66■□□□□ 0.26
HMGN1-206ENST00000431390 Q9H521 79 aa16.66■□□□□ 0.26
HMGN1-206ENST00000431390 SLC7A7Q9UM01 511 aa16.66■□□□□ 0.26
HMGN1-206ENST00000431390 MYO18BQ8IUG5 2567 aa16.66■□□□□ 0.26
HMGN1-206ENST00000431390 A0A0B4J2E0 115 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 A0A1B0GX12 115 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 B8ZZF3 427 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 OIP5O43482 229 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 SCO2O43819 266 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 MAN1A2O60476 641 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 OR6B1O95007 311 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 LINGO3P0C6S8 592 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 CBLP22681 906 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 COPZ1P61923 177 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 ZNF117Q03924 483 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 C17orf67Q0P5P2 114 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 CLN3Q13286 438 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 CRTC2Q53ET0 693 aaPredicted RBP16.65■□□□□ 0.26
HMGN1-206ENST00000431390 ANKRD34AQ69YU3 496 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 CBLN3Q6UW01 205 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 TMEM156Q8N614 296 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 TMCO5AQ8N6Q1 288 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 OR9Q2Q8NGE9 314 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 ACOT11Q8WXI4 607 aaPredicted RBP16.65■□□□□ 0.26
HMGN1-206ENST00000431390 PSMF1Q92530 271 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 DOCK10Q96BY6 2186 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 MGAT4BQ9UQ53 548 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 AP4B1Q9Y6B7 739 aa16.65■□□□□ 0.26
HMGN1-206ENST00000431390 A0A087WUU8 490 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 A0A1B0GWA3 101 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 HCRTR2O43614 444 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 CHP2O43745 196 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 LYPD3O95274 346 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 SNAP29O95721 258 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 ADAP00813 363 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 CDH2P19022 906 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-206ENST00000431390 RYKP34925 604 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 P2RX1P51575 399 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 GAS1P54826 345 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 MERTKQ12866 999 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 SNTA1Q13424 505 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 ACER2Q5QJU3 275 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 SWT1Q5T5J6 900 aaKnown RBP16.64■□□□□ 0.25
HMGN1-206ENST00000431390 ULK3Q6PHR2 472 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 IL20RBQ6UXL0 311 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 NKAIN4Q8IVV8 208 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 APLFQ8IW19 511 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-206ENST00000431390 GPALPP1Q8IXQ4 340 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 CLEC1AQ8NC01 280 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 SNRNP27Q8WVK2 155 aaKnown RBP16.64■□□□□ 0.25
HMGN1-206ENST00000431390 PRSS27Q9BQR3 290 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 ADI1Q9BV57 179 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 LHPPQ9H008 270 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms