RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 PIM3Q86V86 326 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 ZNF248Q8NDW4 579 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 CPEB3Q8NE35 698 aaKnown RBP8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 WFIKKN2Q8TEU8 576 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 WDR89Q96FK6 387 aaPredicted RBP8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 TPD52L3Q96J77 140 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 TGM7Q96PF1 710 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 DERL2Q9GZP9 239 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR10A4Q9H209 315 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR52A5Q9H2C5 316 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 UBQLN3Q9H347 655 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 PRO1933Q9H354 126 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 MAN2C1Q9NTJ4 1040 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 FBXL4Q9UKA2 621 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 MOKQ9UQ07 419 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 PPIL1Q9Y3C6 166 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 CCL27Q9Y4X3 112 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 PLXNB2O15031 1838 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 UBE2QL1A1L167 161 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 RPL36A-HNRNPH2H7BZ11 118 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 BCL2L11O43521 198 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 YIF1AO95070 293 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 ASGR1P07306 291 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 EBLN1P0CF75 366 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 TXNP10599 105 aaKnown RBP8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 EPXP11678 715 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 GABRR2P28476 465 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 CD200P41217 278 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 LIMS1P48059 325 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 MVDP53602 400 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 F2RL1P55085 397 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 H2BFSP57053 126 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 ERVPABLB-1P60509 514 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 RBX1P62877 108 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 DGCR2P98153 550 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 CDK6Q00534 326 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 ACSM1Q08AH1 577 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 PLA2G7Q13093 441 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 NDUFA9Q16795 377 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 SLC5A12Q1EHB4 618 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 C9orf64Q5T6V5 341 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 JMJD6Q6NYC1 403 aaPredicted RBP8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 LPCAT3Q6P1A2 487 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 WDR53Q7Z5U6 358 aaPredicted RBP8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 TP53INP2Q8IXH6 220 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 ZNF614Q8N883 585 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 C22orf15Q8WYQ4 148 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 ATG101Q9BSB4 218 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 WRAP53Q9BUR4 548 aaKnown RBP8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 NOX3Q9HBY0 568 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 TMEM100Q9NV29 134 aa8.27□□□□□ -1.09
CDC42BPA-206ENST00000429440 TBC1D3DA0A087WVF3 549 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 TBC1D3IA0A087WXS9 549 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 TBC1D3EA0A087X179 549 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 TBC1D3KA0A087X1G2 549 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 TBC1D3FA6NER0 549 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 TBC1D3LB9A6J9 549 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 ANHXE9PGG2 379 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 RFXANKO14593 260 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 ARPC1BO15143 372 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 RRP8O43159 456 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 HBP1O60381 514 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 MOSPD3O75425 235 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 ECI2O75521 394 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 GUSBP08236 651 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 HLA-DPA1P20036 260 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 PPP2R1BP30154 601 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 S100A3P33764 101 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 ADRA1AP35348 466 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 CDH12P55289 794 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 NRG3P56975 720 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 AP3S2P59780 193 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 RPL38P63173 70 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 HTRA3P83110 453 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 SPIBQ01892 262 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 SRSF11Q05519 484 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 PJVKQ0ZLH3 352 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 RBM39Q14498 530 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 TMEM132DQ14C87 1099 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 HEPACAMQ14CZ8 416 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 GFOD2Q3B7J2 385 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 PKDCCQ504Y2 493 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 DCAF10Q5QP82 559 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 TBC1D3CQ6IPX1 549 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 CDC73Q6P1J9 531 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 FAM131BQ86XD5 332 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 TBC1D3Q8IZP1 549 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 FAM26EQ8N5C1 309 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 C19orf47Q8N9M1 422 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 BOLLQ8N9W6 283 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR6J1Q8NGC5 347 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR56B1Q8NGI3 324 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR10D4PQ8NGN7 298 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 HUS1BQ8NHY5 278 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 SMIM4Q8WVI0 70 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 MRPS31Q92665 395 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 FOXRED1Q96CU9 486 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 RNFT2Q96EX2 444 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 SCLYQ96I15 445 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 SPACA7Q96KW9 195 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms