RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 A0A1W2PQL4 384 aaPredicted RBP12.64□□□□□ -0.39
THBS3-202ENST00000428962 C12orf71A8MTZ7 269 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 HRO43593 1189 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 FOXS1O43638 330 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 IFNGP01579 166 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 CLEC2LP0C7M8 214 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 CHRNB1P11230 501 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 CELP19835 753 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 SLC6A6P31641 620 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 RNF144AP50876 292 aaPredicted RBP12.64□□□□□ -0.39
THBS3-202ENST00000428962 PLAURQ03405 335 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 ALG10BQ5I7T1 473 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 TCTE1Q5JU00 501 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 XKRXQ6PP77 449 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 FAM131AQ6UXB0 335 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 GDPD3Q7L5L3 318 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 OAFQ86UD1 273 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 MARCH9Q86YJ5 346 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 ARL14Q8N4G2 192 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 ARIH2OSQ8N7S6 290 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 ZFP41Q8N8Y5 198 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 GDPD1Q8N9F7 314 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 LRFN5Q96NI6 719 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 MAP3K3Q99759 626 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 ZNF426Q9BUY5 554 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 ALG8Q9BVK2 526 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 TMED9Q9BVK6 235 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 KCNN2Q9H2S1 579 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 TBC1D17Q9HA65 648 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 TRIM36Q9NQ86 728 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 C14orf119Q9NWQ9 140 aa12.64□□□□□ -0.39
THBS3-202ENST00000428962 DAPL1A0PJW8 107 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 GABRPO00591 440 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 LALBAP00709 142 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 CTSBP07858 339 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 HK1P19367 917 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 CD53P19397 219 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 FUT1P19526 365 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 CD27P26842 260 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 SSTR4P31391 388 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 ACAA2P42765 397 aaKnown RBP12.63□□□□□ -0.39
THBS3-202ENST00000428962 GPR143P51810 404 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 HSD17B7P56937 341 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 RPS7P62081 194 aaKnown RBP12.63□□□□□ -0.39
THBS3-202ENST00000428962 SCN1BQ07699 218 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 POU4F2Q12837 409 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 BIKQ13323 160 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 SERTAD2Q14140 314 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 ZNF267Q14586 743 aaPredicted RBP12.63□□□□□ -0.39
THBS3-202ENST00000428962 SLC35F1Q5T1Q4 408 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 ULK3Q6PHR2 472 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 ZC3H14Q6PJT7 736 aaKnown RBP12.63□□□□□ -0.39
THBS3-202ENST00000428962 RTL4Q6ZR62 310 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 AKAP14Q86UN6 197 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 GATAD2AQ86YP4 633 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 KLBQ86Z14 1044 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 GPALPP1Q8IXQ4 340 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 SLC2A12Q8TD20 617 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 CHAC2Q8WUX2 184 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 DNAJA4Q8WW22 397 aaPredicted RBP12.63□□□□□ -0.39
THBS3-202ENST00000428962 ZNF285Q96NJ3 590 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 MEPEQ9NQ76 525 aaPredicted RBP12.63□□□□□ -0.39
THBS3-202ENST00000428962 FLRT3Q9NZU0 649 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 EPHA6Q9UF33 1036 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 PAIP2BQ9ULR5 123 aaKnown RBP12.63□□□□□ -0.39
THBS3-202ENST00000428962 PCDHGB2Q9Y5G2 931 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 REV3LO60673 3130 aa12.63□□□□□ -0.39
THBS3-202ENST00000428962 SCN2AQ99250 2005 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 FABP12A6NFH5 140 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 EFCAB7A8K855 629 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 PTP4A3O75365 173 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 RGS9O75916 674 aaPredicted RBP12.62□□□□□ -0.39
THBS3-202ENST00000428962 IGKV1D-16P01601 117 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 SPNP16150 400 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 CD38P28907 300 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 GALNSP34059 522 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 TGM4P49221 684 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 PPM1FP49593 454 aaPredicted RBP12.62□□□□□ -0.39
THBS3-202ENST00000428962 ATP12AP54707 1039 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 TAS2R43P59537 309 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 ACTC1P68032 377 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 ACTA1P68133 377 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 SMAD4Q13485 552 aaKnown RBP12.62□□□□□ -0.39
THBS3-202ENST00000428962 GALEQ14376 348 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 GAS6Q14393 721 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 TRAM1Q15629 374 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 ZNF79Q15937 498 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 GLYR1Q49A26 553 aaPredicted RBP12.62□□□□□ -0.39
THBS3-202ENST00000428962 KLHL12Q53G59 568 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 MZT2AQ6P582 158 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 THSD4Q6ZMP0 1018 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 ZNF440Q8IYI8 595 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 SYT14Q8NB59 555 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 SLC37A3Q8NCC5 494 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 NEIL3Q8TAT5 605 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 LMX1AQ8TE12 382 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 OIT3Q8WWZ8 545 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 RLN3Q8WXF3 142 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 KISS1RQ969F8 398 aaPredicted RBP12.62□□□□□ -0.39
THBS3-202ENST00000428962 DIRAS2Q96HU8 199 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms