RNA–Protein interactions for RNA: ENST00000428740.5

IMP4-204, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-204ENST00000428740 RFWD2Q8NHY2 731 aa13.45□□□□□ -0.26
IMP4-204ENST00000428740 ST8SIA1Q92185 356 aa13.45□□□□□ -0.26
IMP4-204ENST00000428740 TEX37Q96LM6 180 aa13.45□□□□□ -0.26
IMP4-204ENST00000428740 TRNT1Q96Q11 434 aaKnown RBP13.45□□□□□ -0.26
IMP4-204ENST00000428740 TACO1Q9BSH4 297 aaKnown RBP13.45□□□□□ -0.26
IMP4-204ENST00000428740 THUMPD3Q9BV44 507 aaKnown RBP13.45□□□□□ -0.26
IMP4-204ENST00000428740 SERHL2Q9H4I8 314 aa13.45□□□□□ -0.26
IMP4-204ENST00000428740 RMND5AQ9H871 391 aa13.45□□□□□ -0.26
IMP4-204ENST00000428740 MTHFD2LQ9H903 347 aaPredicted RBP13.45□□□□□ -0.26
IMP4-204ENST00000428740 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.45□□□□□ -0.26
IMP4-204ENST00000428740 ZIM2Q9NZV7 527 aa13.45□□□□□ -0.26
IMP4-204ENST00000428740 ETV2O00321 342 aaPredicted RBP13.44□□□□□ -0.26
IMP4-204ENST00000428740 RFXANKO14593 260 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 DNAJA2O60884 412 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 CYP7B1O75881 506 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 OPN1LWP04000 364 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 PPP3CBP16298 524 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 DNASE1P24855 282 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 SFTPDP35247 375 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 CCR4P51679 360 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 FAM27E3Q08E93 113 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 FOXF1Q12946 379 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 QPRTQ15274 297 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 TESK1Q15569 626 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 TMEM176BQ3YBM2 270 aaPredicted RBP13.44□□□□□ -0.26
IMP4-204ENST00000428740 ZNF474Q6S9Z5 364 aaPredicted RBP13.44□□□□□ -0.26
IMP4-204ENST00000428740 MSANTD1Q6ZTZ1 278 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 BEND4Q6ZU67 534 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 CMIPQ8IY22 773 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 ZNF619Q8N2I2 560 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 SLC43A2Q8N370 569 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 RAB8BQ92930 207 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 ATP6V1G3Q96LB4 118 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 C7orf26Q96N11 449 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 OPN3Q9H1Y3 402 aaPredicted RBP13.44□□□□□ -0.26
IMP4-204ENST00000428740 TMEM185BQ9H7F4 350 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 SDR39U1Q9NRG7 319 aaPredicted RBP13.44□□□□□ -0.26
IMP4-204ENST00000428740 ARGLU1Q9NWB6 273 aaPredicted RBP13.44□□□□□ -0.26
IMP4-204ENST00000428740 ST6GALNAC2Q9UJ37 374 aa13.44□□□□□ -0.26
IMP4-204ENST00000428740 OIP5O43482 229 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 EFNA2O43921 213 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 KIAA0513O60268 411 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 DIAPH2O60879 1101 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 PRKD3O94806 890 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 ANP32DO95626 131 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 NTN1O95631 604 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 ZCCHC18P0CG32 403 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 IL12AP29459 219 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 SLC7A1P30825 629 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 UGT2B10P36537 528 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 SLC6A8P48029 635 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 CASP9P55211 416 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 RAC3P60763 192 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 IRX1P78414 480 aaPredicted RBP13.43□□□□□ -0.26
IMP4-204ENST00000428740 KCNJ10P78508 379 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 SKP2Q13309 424 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 TMEM201Q5SNT2 666 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 TYW3Q6IPR3 259 aaKnown RBP13.43□□□□□ -0.26
IMP4-204ENST00000428740 HDXQ7Z353 690 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 RNF130Q86XS8 419 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 MIER2Q8N344 545 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 LRRC8CQ8TDW0 803 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 NPAS1Q99742 590 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 FOXC2Q99958 501 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 EXOSC3Q9NQT5 275 aaKnown RBP13.43□□□□□ -0.26
IMP4-204ENST00000428740 ACER3Q9NUN7 267 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 THUMPD1Q9NXG2 353 aaKnown RBP13.43□□□□□ -0.26
IMP4-204ENST00000428740 CALML5Q9NZT1 146 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 KCNE5Q9UJ90 142 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 TESMINQ9Y4I5 508 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 SPIN1Q9Y657 262 aaPredicted RBP13.43□□□□□ -0.26
IMP4-204ENST00000428740 USH1CQ9Y6N9 552 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 DOCK7Q96N67 2140 aa13.43□□□□□ -0.26
IMP4-204ENST00000428740 MED12Q93074 2177 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 KIAA1549Q9HCM3 1950 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 HMGN4O00479 90 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 UBTFL6P0CB48 400 aaPredicted RBP13.42□□□□□ -0.26
IMP4-204ENST00000428740 NR2F1P10589 423 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 PGM1P36871 562 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 APOBEC1P41238 236 aaKnown RBP13.42□□□□□ -0.26
IMP4-204ENST00000428740 CLK1P49759 484 aaKnown RBP13.42□□□□□ -0.26
IMP4-204ENST00000428740 ART1P52961 327 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 IST1P53990 364 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 SESN3P58005 492 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 TOMM34Q15785 309 aaPredicted RBP13.42□□□□□ -0.26
IMP4-204ENST00000428740 NDUFAF6Q330K2 333 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 TIGD2Q4W5G0 525 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 SLC9B1Q4ZJI4 515 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 C3orf33Q6P1S2 294 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 EPGNQ6UW88 154 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 LRRC74BQ6ZQY2 392 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 ARFGAP2Q8N6H7 521 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 ZNF563Q8TA94 476 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 ZFP90Q8TF47 636 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 SLC25A43Q8WUT9 341 aaPredicted RBP13.42□□□□□ -0.26
IMP4-204ENST00000428740 DYDC1Q8WWB3 177 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 ITCHQ96J02 903 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 WFIKKN1Q96NZ8 548 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 MED18Q9BUE0 208 aa13.42□□□□□ -0.26
IMP4-204ENST00000428740 HDHD5Q9BXW7 423 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms