RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 SLC7A1P30825 629 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 ETV4P43268 484 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 PTH2RP49190 550 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 NR1H2P55055 460 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 CASP9P55211 416 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 QPRTQ15274 297 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 CHI3L2Q15782 390 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 KRT71Q3SY84 523 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 EMBQ6PCB8 327 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 BHLHB9Q6PI77 547 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 ZNF619Q8N2I2 560 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 ZNF781Q8N8C0 355 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 TOR1AIP2Q8NFQ8 470 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 S100PBPQ96BU1 408 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 ZNF524Q96C55 264 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 MRGPRX4Q96LA9 322 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 SDF2Q99470 211 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.21■□□□□ 0.03
TRIM39-209ENST00000428728 GPR52Q9Y2T5 361 aa15.21■□□□□ 0.03
TRIM39-209ENST00000428728 V9GYY5 206 aaPredicted RBP15.21■□□□□ 0.03
TRIM39-209ENST00000428728 CENPVL1A0A0U1RR11 272 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 SOX30O94993 753 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 LY6G6DO95868 133 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 HEXAP06865 529 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 IL32P24001 234 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 CLDN8P56748 225 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 C21orf58P58505 322 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 EMX2Q04743 252 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 CBFBQ13951 182 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 C16orf62Q7Z3J2 963 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 C6orf120Q7Z4R8 191 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 ANKRD46Q86W74 232 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 STEAP2Q8NFT2 490 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 OR4A15Q8NGL6 344 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 OR5W2Q8NH69 310 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 TMEM171Q8WVE6 324 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 TACO1Q9BSH4 297 aaKnown RBP15.2■□□□□ 0.02
TRIM39-209ENST00000428728 QRSL1Q9H0R6 528 aaKnown RBP15.2■□□□□ 0.02
TRIM39-209ENST00000428728 ASIC5Q9NY37 505 aa15.2■□□□□ 0.02
TRIM39-209ENST00000428728 SERINC4A6NH21 518 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 HS3ST1O14792 307 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 EIF4E2O60573 245 aaKnown RBP15.19■□□□□ 0.02
TRIM39-209ENST00000428728 GCM2O75603 506 aaPredicted RBP15.19■□□□□ 0.02
TRIM39-209ENST00000428728 PRKD3O94806 890 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 SERPINE1P05121 402 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 ENPP1P22413 925 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 SKP2Q13309 424 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 C3orf33Q6P1S2 294 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 PRSS57Q6UWY2 283 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 GABRG1Q8N1C3 465 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 RAB3IL1Q8TBN0 382 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 OR5B2Q96R09 309 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 BDH2Q9BUT1 245 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 GSX2Q9BZM3 304 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 DPY30Q9C005 99 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 NMUR2Q9GZQ4 415 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 OR10A4Q9H209 315 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 OR51I1Q9H343 314 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 AKTIPQ9H8T0 292 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 KCNE5Q9UJ90 142 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 MKLN1Q9UL63 735 aa15.19■□□□□ 0.02
TRIM39-209ENST00000428728 NIPBLQ6KC79 2804 aaeCLIP15.18■□□□□ 0.02
TRIM39-209ENST00000428728 DUXAA6NLW8 204 aa15.18■□□□□ 0.02
TRIM39-209ENST00000428728 FAM171A2A8MVW0 826 aa15.18■□□□□ 0.02
TRIM39-209ENST00000428728 ESPNB1AK53 854 aa15.18■□□□□ 0.02
TRIM39-209ENST00000428728 RNASET2O00584 256 aaKnown RBP15.18■□□□□ 0.02
TRIM39-209ENST00000428728 FCMRO60667 390 aa15.18■□□□□ 0.02
TRIM39-209ENST00000428728 STX11O75558 287 aa15.18■□□□□ 0.02
TRIM39-209ENST00000428728 H6PDO95479 791 aa15.18■□□□□ 0.02
TRIM39-209ENST00000428728 AK1P00568 194 aa15.18■□□□□ 0.02
TRIM39-209ENST00000428728 CSTAP01040 98 aa15.18■□□□□ 0.02
TRIM39-209ENST00000428728 UBTFL6P0CB48 400 aaPredicted RBP15.18■□□□□ 0.02
TRIM39-209ENST00000428728 ABCE1P61221 599 aaKnown RBP15.18■□□□□ 0.02
TRIM39-209ENST00000428728 CAPRIN1Q14444 709 aaKnown RBP15.18■□□□□ 0.02
TRIM39-209ENST00000428728 TIGD2Q4W5G0 525 aa15.18■□□□□ 0.02
TRIM39-209ENST00000428728 SLC25A53Q5H9E4 307 aa15.18■□□□□ 0.02
TRIM39-209ENST00000428728 TNFAIP8L2Q6P589 184 aaPredicted RBP15.18■□□□□ 0.02
TRIM39-209ENST00000428728 AKAP1Q92667 903 aaKnown RBP eCLIP15.18■□□□□ 0.02
TRIM39-209ENST00000428728 ZBTB9Q96C00 473 aa15.18■□□□□ 0.02
TRIM39-209ENST00000428728 THUMPD3Q9BV44 507 aaKnown RBP15.18■□□□□ 0.02
TRIM39-209ENST00000428728 ZNF350Q9GZX5 532 aa15.18■□□□□ 0.02
TRIM39-209ENST00000428728 CXorf56Q9H5V9 222 aa15.18■□□□□ 0.02
TRIM39-209ENST00000428728 KLHL9Q9P2J3 617 aa15.18■□□□□ 0.02
TRIM39-209ENST00000428728 PCDHGB4Q9UN71 923 aa15.18■□□□□ 0.02
TRIM39-209ENST00000428728 FN1P02751 2386 aaKnown RBP15.18■□□□□ 0.02
TRIM39-209ENST00000428728 NSD1Q96L73 2696 aaPredicted RBP15.17■□□□□ 0.02
TRIM39-209ENST00000428728 RGS16O15492 202 aaPredicted RBP15.17■□□□□ 0.02
TRIM39-209ENST00000428728 CLOCKO15516 846 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 UGT2B17O75795 530 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 CPSF4O95639 269 aaKnown RBP15.17■□□□□ 0.02
TRIM39-209ENST00000428728 ADAP00813 363 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 YES1P07947 543 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 MYZAPP0CAP1 466 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 OR12D1P0DN82 309 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 RAC3P60763 192 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 MERTKQ12866 999 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 ZNF141Q15928 474 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 SMU1Q2TAY7 513 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 ARHGAP11BQ3KRB8 267 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 SFRP5Q5T4F7 317 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms