RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 CCDC88CQ9P219 2028 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 A0A1B0GWA3 101 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 TRAPPC13A5PLN9 417 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 PINLYPA6NC86 204 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 FAM166BA8MTA8 275 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 J3KTA2 159 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 K7EM74 188 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 ACOT7O00154 380 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 ADAMDEC1O15204 470 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 HNRNPRO43390 633 aaKnown RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 TPST2O60704 377 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 DPM1O60762 260 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 ADAM11O75078 769 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 DEAF1O75398 565 aaPredicted RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 E2F6O75461 281 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 OR5F1O95221 314 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 CST1P01037 141 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 H1F0P07305 194 aaKnown RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 GP1BBP13224 206 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 RHCEP18577 417 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 FASP25445 335 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 GDF1P27539 372 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 MSX1P28360 303 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 RRM2P31350 389 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 ACAA2P42765 397 aaKnown RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 IDH2P48735 452 aaKnown RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 CDH12P55289 794 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 SESN3P58005 492 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 FOXF1Q12946 379 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 PIN1Q13526 163 aaPredicted RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 ZNF169Q14929 603 aaPredicted RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 OR1Q1Q15612 314 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 ATP6AP1Q15904 470 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 ENTPD8Q5MY95 495 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 RAET1LQ5VY80 246 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 OR2T5Q6IEZ7 315 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 POMZP3Q6PJE2 187 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 ARSKQ6UWY0 536 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 IGFL3Q6UXB1 125 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 PIWIL3Q7Z3Z3 882 aaKnown RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 OFCC1Q8IZS5 231 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 FADS6Q8N9I5 356 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 FAM98AQ8NCA5 519 aaKnown RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 PAPD5Q8NDF8 572 aaKnown RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 OR2M3Q8NG83 312 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 OR2T29Q8NH02 315 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 OR52J3Q8NH60 311 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 ADAMTS16Q8TE57 1224 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 PHF10Q8WUB8 498 aaKnown RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 NR4A3Q92570 626 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 C1GALT1C1Q96EU7 318 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 DTNBP1Q96EV8 351 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 DUS3LQ96G46 650 aaKnown RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 SCMH1Q96GD3 660 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 C7orf34Q96L11 122 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 FRMD6Q96NE9 622 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 GNRHR2Q96P88 292 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 KLHDC3Q9BQ90 382 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 FNDC11Q9BVV2 318 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 PRORYQ9H606 182 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 REEP1Q9H902 201 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 ZFP64Q9NPA5 681 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 ZNF71Q9NQZ8 489 aaPredicted RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 MED17Q9NVC6 651 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 TAS2R10Q9NYW0 307 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 LUZP4Q9P127 313 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 DNAJB9Q9UBS3 223 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 SLC7A7Q9UM01 511 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 VDAC3Q9Y277 283 aa7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 SAMHD1Q9Y3Z3 626 aaKnown RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 NUP214P35658 2090 aaPredicted RBP7.2□□□□□ -1.26
HMGA1P4-201ENST00000428643 A0A087WZY1 265 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 A0A0B4J2E0 115 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 A0A1B0GX12 115 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 ELOA3DA6NLF2 546 aaPredicted RBP7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 B4DXG7 233 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 FAAHO00519 579 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 CLOCKO15516 846 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 SEMA7AO75326 666 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 CBR3O75828 277 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 TRAPPC6AO75865 159 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 ANPEPP15144 967 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 ZNF24P17028 368 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 HK1P19367 917 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 PTNP21246 168 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 MST1P26927 711 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 DPP4P27487 766 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 SRD5A2P31213 254 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 DSCR4P56555 118 aaPredicted RBP7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 SMIM11AP58511 58 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 PMP22Q01453 160 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 FOXO1Q12778 655 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 MERTKQ12866 999 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 TOMM34Q15785 309 aaPredicted RBP7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 ST3GAL2Q16842 350 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 PLPPR5Q32ZL2 321 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 ELOA3BQ3SY89 546 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 ALG10BQ5I7T1 473 aa7.19□□□□□ -1.26
HMGA1P4-201ENST00000428643 COLEC12Q5KU26 742 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms