RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ZNF226Q9NYT6 803 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 C2CD3Q4AC94 2353 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 DEFB108AA8MXU0 73 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 EIF4E2O60573 245 aaKnown RBP16.44■□□□□ 0.22
PSPC1-202ENST00000427943 UGT2B17O75795 530 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 CSTAP01040 98 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 CRYGSP22914 178 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 ADH6P28332 368 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 EPHA3P29320 983 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 AGTR1P30556 359 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 S100A3P33764 101 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 FUT5Q11128 374 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 SKP2Q13309 424 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 CBFBQ13951 182 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 ZNF141Q15928 474 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 DPY19L1Q2PZI1 675 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 DEFB113Q30KQ7 82 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 TMEM176BQ3YBM2 270 aaPredicted RBP16.44■□□□□ 0.22
PSPC1-202ENST00000427943 HEPHL1Q6MZM0 1159 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 C22orf34Q6ZV56 151 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 HMGN2P46Q86SG4 172 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 TGIF2LYQ8IUE0 185 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 LRRC34Q8IZ02 419 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 RNF128Q8TEB7 428 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 ABHD3Q8WU67 409 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 XAGE5Q8WWM1 108 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 MBD6Q96DN6 1003 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 WDR55Q9H6Y2 383 aaPredicted RBP16.44■□□□□ 0.22
PSPC1-202ENST00000427943 PLSCR4Q9NRQ2 329 aa16.44■□□□□ 0.22
PSPC1-202ENST00000427943 DSCAMO60469 2012 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 PRR14LQ5THK1 2151 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 A0A1W2PNR3 127 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 KIAA0513O60268 411 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 SNNO75324 88 aaPredicted RBP16.43■□□□□ 0.22
PSPC1-202ENST00000427943 UBTFL6P0CB48 400 aaPredicted RBP16.43■□□□□ 0.22
PSPC1-202ENST00000427943 CD99P14209 185 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 NID1P14543 1247 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 IL12AP29459 219 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 CHI3L1P36222 383 aaPredicted RBP16.43■□□□□ 0.22
PSPC1-202ENST00000427943 KHKP50053 298 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 MAGOHP61326 146 aaKnown RBP16.43■□□□□ 0.22
PSPC1-202ENST00000427943 SELENBP1Q13228 472 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 MAPK14Q16539 360 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 ATAD3BQ5T9A4 648 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 ZFP90Q8TF47 636 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 CPNE4Q96A23 557 aaPredicted RBP16.43■□□□□ 0.22
PSPC1-202ENST00000427943 ROPN1LQ96C74 230 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 NEURL3Q96EH8 262 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 REXO5Q96IC2 774 aaKnown RBP16.43■□□□□ 0.22
PSPC1-202ENST00000427943 MRGPRX4Q96LA9 322 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 THUMPD3Q9BV44 507 aaKnown RBP16.43■□□□□ 0.22
PSPC1-202ENST00000427943 QRSL1Q9H0R6 528 aaKnown RBP16.43■□□□□ 0.22
PSPC1-202ENST00000427943 GLRX2Q9NS18 164 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 THAP1Q9NVV9 213 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 WDR45Q9Y484 360 aa16.43■□□□□ 0.22
PSPC1-202ENST00000427943 ZNF469Q96JG9 3925 aaPredicted RBP16.42■□□□□ 0.22
PSPC1-202ENST00000427943 IGHV3-15A0A0B4J1V0 119 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 GJE1A6NN92 205 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 HDAC3O15379 428 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 NTN1O95631 604 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 AGR2O95994 175 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 CD53P19397 219 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 KLK2P20151 261 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 PPP2R2AP63151 447 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 SLC25A53Q5H9E4 307 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 TYW3Q6IPR3 259 aaKnown RBP16.42■□□□□ 0.22
PSPC1-202ENST00000427943 FRRS1Q6ZNA5 592 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 SPATA19Q7Z5L4 167 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 MARK4Q96L34 752 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 CCDC115Q96NT0 180 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 HS3ST6Q96QI5 342 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 INPP5KQ9BT40 448 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 TMUB1Q9BVT8 246 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 LAT2Q9GZY6 243 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 TIGARQ9NQ88 270 aa16.42■□□□□ 0.22
PSPC1-202ENST00000427943 FLNAP21333 2647 aaKnown RBP16.42■□□□□ 0.22
PSPC1-202ENST00000427943 BCAS1O75363 584 aaPredicted RBP16.41■□□□□ 0.22
PSPC1-202ENST00000427943 H6PDO95479 791 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 SLC7A1P30825 629 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 CDKN2CP42773 168 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 RIPPLY3P57055 190 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 FOXD4Q12950 439 aaPredicted RBP16.41■□□□□ 0.22
PSPC1-202ENST00000427943 GPAT3Q53EU6 434 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 NXNQ6DKJ4 435 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 C3orf33Q6P1S2 294 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 STAC2Q6ZMT1 411 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 FCRLAQ7L513 359 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 NUFIP2Q7Z417 695 aaKnown RBP16.41■□□□□ 0.22
PSPC1-202ENST00000427943 RNF130Q86XS8 419 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 TLCD1Q96CP7 247 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 PANX1Q96RD7 426 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 UBTD1Q9HAC8 227 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 NKIRAS1Q9NYS0 192 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 BTNL2Q9UIR0 455 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 GPR45Q9Y5Y3 372 aa16.41■□□□□ 0.22
PSPC1-202ENST00000427943 MTORP42345 2549 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 PRAMEF27A3QJZ7 478 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 TRPC5OSA6NMA1 111 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 DIAPH2O60879 1101 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 ERLIN1O75477 346 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms