RNA–Protein interactions for RNA: ENST00000427771.1

TRAK1-205, Transcript of trafficking kinesin protein 1, humanhuman

TSL 3

Gene TRAK1, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-205ENST00000427771 TCF7L2Q9NQB0 619 aa17.12■□□□□ 0.33
TRAK1-205ENST00000427771 POLE3Q9NRF9 147 aa17.12■□□□□ 0.33
TRAK1-205ENST00000427771 CLEC4AQ9UMR7 237 aa17.12■□□□□ 0.33
TRAK1-205ENST00000427771 GPC6Q9Y625 555 aaPredicted RBP17.12■□□□□ 0.33
TRAK1-205ENST00000427771 HRNRQ86YZ3 2850 aaPredicted RBP17.11■□□□□ 0.33
TRAK1-205ENST00000427771 AKAP9Q99996 3911 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 CLDN24A6NM45 220 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 CTAG2O75638 210 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 NTN1O95631 604 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 CHRM4P08173 479 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 FCGR2AP12318 317 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 CAPN3P20807 821 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 IDH3AP50213 366 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 POLR2JP52435 117 aaKnown RBP17.11■□□□□ 0.33
TRAK1-205ENST00000427771 PPP2R2AP63151 447 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 CHRNEQ04844 493 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 LRRC74AQ0VAA2 488 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 FGFBP1Q14512 234 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 ESPNLQ6ZVH7 1005 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 LSRQ86X29 649 aaPredicted RBP17.11■□□□□ 0.33
TRAK1-205ENST00000427771 ATP6V1C2Q8NEY4 427 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 TOR1AIP2Q8NFQ8 470 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 FAM222BQ8WU58 562 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 AURKBQ96GD4 344 aaPredicted RBP17.11■□□□□ 0.33
TRAK1-205ENST00000427771 THUMPD3Q9BV44 507 aaKnown RBP17.11■□□□□ 0.33
TRAK1-205ENST00000427771 LAT2Q9GZY6 243 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 INTS9Q9NV88 658 aaKnown RBP17.11■□□□□ 0.33
TRAK1-205ENST00000427771 SPG11Q96JI7 2443 aa17.11■□□□□ 0.33
TRAK1-205ENST00000427771 A6NNC1 897 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 ENO4A6NNW6 628 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 MSTNO14793 375 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 POLR3GO15318 223 aaPredicted RBP17.1■□□□□ 0.33
TRAK1-205ENST00000427771 CGAP01215 116 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 GUSBP08236 651 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 PGM1P36871 562 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 MVDP53602 400 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 HPCAP84074 193 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 CBFBQ13951 182 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 ZNF474Q6S9Z5 364 aaPredicted RBP17.1■□□□□ 0.33
TRAK1-205ENST00000427771 EIF3MQ7L2H7 374 aaKnown RBP17.1■□□□□ 0.33
TRAK1-205ENST00000427771 FAM71CQ8NEG0 241 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 ZFP90Q8TF47 636 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 MRGPRX4Q96LA9 322 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 SRXN1Q9BYN0 137 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 PRRG4Q9BZD6 226 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 SLC38A1Q9H2H9 487 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 COQ10BQ9H8M1 238 aa17.1■□□□□ 0.33
TRAK1-205ENST00000427771 DNAJB12Q9NXW2 375 aaKnown RBP17.1■□□□□ 0.33
TRAK1-205ENST00000427771 MCTS1Q9ULC4 181 aaKnown RBP17.1■□□□□ 0.33
TRAK1-205ENST00000427771 FAM234BA2RU67 622 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 ETV2O00321 342 aaPredicted RBP17.09■□□□□ 0.33
TRAK1-205ENST00000427771 DNAJA2O60884 412 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 TGDSO95455 350 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 SYNGR4O95473 234 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 ADH6P28332 368 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 AQP5P55064 265 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 EEF1A1P68104 462 aaKnown RBP17.09■□□□□ 0.33
TRAK1-205ENST00000427771 FAM27E3Q08E93 113 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 MAPK11Q15759 364 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 TMEM176BQ3YBM2 270 aaPredicted RBP17.09■□□□□ 0.33
TRAK1-205ENST00000427771 SLC25A53Q5H9E4 307 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 C6orf10Q5SRN2 563 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 EEF1A1P5Q5VTE0 462 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 AP1ARQ63HQ0 302 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 SLC2A7Q6PXP3 512 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 FAM214BQ7L5A3 538 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 ROBO4Q8WZ75 1007 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 OSTF1Q92882 214 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 TRNT1Q96Q11 434 aaKnown RBP17.09■□□□□ 0.33
TRAK1-205ENST00000427771 POLDIP3Q9BY77 421 aaKnown RBP17.09■□□□□ 0.33
TRAK1-205ENST00000427771 RASSF1Q9NS23 344 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 PAQR5Q9NXK6 330 aaPredicted RBP17.09■□□□□ 0.33
TRAK1-205ENST00000427771 ITGB1BP2Q9UKP3 347 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 AKAP6Q13023 2319 aa17.09■□□□□ 0.33
TRAK1-205ENST00000427771 FAM221AA4D161 298 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 ADAM11O75078 769 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 ANP32DO95626 131 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 KRT75O95678 551 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 PLGP00747 810 aaPredicted RBP17.08■□□□□ 0.32
TRAK1-205ENST00000427771 ETFAP13804 333 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 NID1P14543 1247 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 CCKARP32238 428 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 ANXA11P50995 505 aaKnown RBP17.08■□□□□ 0.32
TRAK1-205ENST00000427771 CARD18P57730 90 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 SESN3P58005 492 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 SELENBP1Q13228 472 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 ZNF239Q16600 458 aaKnown RBP17.08■□□□□ 0.32
TRAK1-205ENST00000427771 MSANTD1Q6ZTZ1 278 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 ZNF610Q8N9Z0 462 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 CKAP2Q8WWK9 683 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 THOC1Q96FV9 657 aaKnown RBP17.08■□□□□ 0.32
TRAK1-205ENST00000427771 ITCHQ96J02 903 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 CLEC4MQ9H2X3 399 aaPredicted RBP17.08■□□□□ 0.32
TRAK1-205ENST00000427771 RMND5AQ9H871 391 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 LIPT1Q9Y234 373 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 SLC35A3Q9Y2D2 325 aa17.08■□□□□ 0.32
TRAK1-205ENST00000427771 A0A1W2PNR3 127 aa17.07■□□□□ 0.32
TRAK1-205ENST00000427771 AGAP5A6NIR3 686 aa17.07■□□□□ 0.32
TRAK1-205ENST00000427771 SS18L1O75177 396 aaPredicted RBP17.07■□□□□ 0.32
TRAK1-205ENST00000427771 ZCCHC18P0CG32 403 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms