RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 ASPDHA6ND91 283 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 NRG2O14511 850 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-204ENST00000427724 TOXO94900 526 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 MLLT10P55197 1068 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 YBX1P67809 324 aaKnown RBP9.92□□□□□ -0.82
TCOF1-204ENST00000427724 RHAGQ02094 409 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 MRPL49Q13405 166 aaKnown RBP9.92□□□□□ -0.82
TCOF1-204ENST00000427724 RGNQ15493 299 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 FAM111BQ6SJ93 734 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 GFRALQ6UXV0 394 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 FRRS1Q6ZNA5 592 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 BTN2A1Q7KYR7 527 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 BMP8AQ7Z5Y6 402 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 FAM109AQ8N4B1 249 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 OR14A16Q8NHC5 309 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 CIDECQ96AQ7 238 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-204ENST00000427724 DNAH12Q6ZR08 3092 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 CLCA1A8K7I4 914 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 SSTR4P31391 388 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 RAB38P57729 211 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 CSNK1G2P78368 415 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 ST3GAL3Q11203 375 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 HNRNPA0Q13151 305 aaKnown RBP9.92□□□□□ -0.82
TCOF1-204ENST00000427724 KEAP1Q14145 624 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF433Q8N7K0 673 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-204ENST00000427724 OR1J4Q8NGS1 313 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 ZCCHC14Q8WYQ9 949 aaKnown RBP9.92□□□□□ -0.82
TCOF1-204ENST00000427724 TMEM74BQ9NUR3 256 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 MCUBQ9NWR8 336 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 ASB6Q9NWX5 421 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 SLC25A37Q9NYZ2 338 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 B3GALT1Q9Y5Z6 326 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 TRAV6A0A075B6T7 132 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 LOC105369274A0A096LPK9 316 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 LOC102723532A0A0G2JNH3 316 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 A0A1W2PPL8 197 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 LNP1A1A4G5 178 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 C2orf72A6NCS6 295 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF43P17038 809 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 FCARP24071 287 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 MAN2A2P49641 1150 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 CLRN1P58418 232 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 ISL1P61371 349 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 DNM1P34Q6PK57 102 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 OR4N4Q8N0Y3 316 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 DTX3Q8N9I9 347 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 ALG14Q96F25 216 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 SENP5Q96HI0 755 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-204ENST00000427724 MED30Q96HR3 178 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 CCDC115Q96NT0 180 aa9.92□□□□□ -0.82
TCOF1-204ENST00000427724 COL25A1Q9BXS0 654 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-204ENST00000427724 NFKBIL1Q9UBC1 381 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-204ENST00000427724 NCOR2Q9Y618 2525 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 TCF20Q9UGU0 1960 aaKnown RBP9.91□□□□□ -0.82
TCOF1-204ENST00000427724 A6NLC8 198 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 GJE1A6NN92 205 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 INMT-MINDY4F8WBC2 141 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 H7C0S8 307 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 AGFG2O95081 481 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 IFNA7P01567 189 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 RPS18P62269 152 aaKnown RBP9.91□□□□□ -0.82
TCOF1-204ENST00000427724 PPP2R2BQ00005 443 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 GALK2Q01415 458 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 KCNC4Q03721 635 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 ECH1Q13011 328 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 EFR3AQ14156 821 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 FGFBP1Q14512 234 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 CSRP2Q16527 193 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 SLC35F1Q5T1Q4 408 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 CCNJQ5T5M9 372 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF613Q6PF04 617 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 SERPINA11Q86U17 422 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 BPHLQ86WA6 291 aaPredicted RBP9.91□□□□□ -0.82
TCOF1-204ENST00000427724 BOLLQ8N9W6 283 aaKnown RBP9.91□□□□□ -0.82
TCOF1-204ENST00000427724 SPERTQ8NA61 448 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 RNASE11Q8TAA1 199 aaKnown RBP9.91□□□□□ -0.82
TCOF1-204ENST00000427724 FATE1Q969F0 183 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 MUCL1Q96DR8 90 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 PIP5K1AQ99755 562 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 DPCDQ9BVM2 203 aaPredicted RBP9.91□□□□□ -0.82
TCOF1-204ENST00000427724 HHATLQ9HCP6 504 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 SLC5A10A0PJK1 596 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 LILRA5A6NI73 299 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 GABRR3A8MPY1 467 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 SLCO2B1O94956 709 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 HMGN2P05204 90 aaKnown RBP9.91□□□□□ -0.82
TCOF1-204ENST00000427724 TRA2AQ13595 282 aaKnown RBP eCLIP9.91□□□□□ -0.822e-13■■■■■ 31.7
TCOF1-204ENST00000427724 PXDC1Q5TGL8 231 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 DUSP19Q8WTR2 217 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 ZFP3Q96NJ6 502 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 SNX18Q96RF0 628 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 ARPC5LQ9BPX5 153 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 RBM24Q9BX46 236 aaKnown RBP9.91□□□□□ -0.82
TCOF1-204ENST00000427724 NTN4Q9HB63 628 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 PLA2G3Q9NZ20 509 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 PPT2Q9UMR5 302 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 PTPRFP10586 1907 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 OR2W5A6NFC9 320 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 PGRMC2O15173 223 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 ALX3O95076 343 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms