RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 IGHG1P01857 330 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 GRB7Q14451 532 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 ATPAF1Q5TC12 328 aaPredicted RBP13.6□□□□□ -0.23
PTPN13-203ENST00000427191 NADSYN1Q6IA69 706 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 RPL22L1Q6P5R6 122 aaKnown RBP13.6□□□□□ -0.23
PTPN13-203ENST00000427191 OR6V1Q8N148 313 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 TLE1Q04724 770 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 WBP2NLQ6ICG8 309 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 LCTLQ6UWM7 567 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 RBM24Q9BX46 236 aaKnown RBP13.6□□□□□ -0.23
PTPN13-203ENST00000427191 ENKD1Q9H0I2 346 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 GKN1Q9NS71 199 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 ZNF623O75123 536 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 AVPI1Q5T686 147 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 FAM69BQ5VUD6 431 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 TANGO2Q6ICL3 276 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 FAM122CQ6P4D5 195 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 MEX3BQ6ZN04 569 aaKnown RBP13.6□□□□□ -0.23
PTPN13-203ENST00000427191 OR1J2Q8NGS2 313 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 GPR150Q8NGU9 434 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 PHYHIPQ92561 330 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 SDSLQ96GA7 329 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 LURAP1Q96LR2 239 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 A0A1W2PPH5 198 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 TGOLN2O43493 480 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 HOXD12P35452 270 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 CSNK1A1P48729 337 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 PKDCCQ504Y2 493 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 PSMF1Q92530 271 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SLC12A9Q9BXP2 914 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SPHK2Q9NRA0 654 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 MRPL15Q9P015 296 aaKnown RBP13.59□□□□□ -0.23
PTPN13-203ENST00000427191 CACFD1Q9UGQ2 172 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 XRN1Q8IZH2 1706 aaKnown RBP13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SCAMP1O15126 338 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SURF4O15260 269 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 PRDX3P30048 256 aaKnown RBP13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SNRPD2P62316 118 aaKnown RBP13.59□□□□□ -0.23
PTPN13-203ENST00000427191 TATDN3Q17R31 274 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SFRP5Q5T4F7 317 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 WDR5BQ86VZ2 330 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 CREB3L4Q8TEY5 395 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 E9PI62 339 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 PTBP1P26599 531 aaKnown RBP eCLIP13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SLC5A8Q8N695 610 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 GATSQ8NAP1 163 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SAP130Q9H0E3 1048 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 POLHQ9Y253 713 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 PTGER4P35408 488 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 P2RX1P51575 399 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 KIR2DS3Q14952 304 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 LY6G5CQ5SRR4 150 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 CST9LP1Q5W188 147 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.59□□□□□ -0.23
PTPN13-203ENST00000427191 RNF113BQ8IZP6 322 aaKnown RBP13.59□□□□□ -0.23
PTPN13-203ENST00000427191 PLPP5Q8NEB5 264 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SEMA6DQ8NFY4 1073 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 OCSTAMPQ9BR26 566 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SEMA4GQ9NTN9 838 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SIDT1Q9NXL6 827 aaKnown RBP13.59□□□□□ -0.23
PTPN13-203ENST00000427191 RIMS3Q9UJD0 308 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 PSAT1Q9Y617 370 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 STATHP02808 62 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SNRNP70P08621 437 aaKnown RBP13.59□□□□□ -0.23
PTPN13-203ENST00000427191 CNR1P21554 472 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 RPL13AP40429 203 aaKnown RBP13.59□□□□□ -0.23
PTPN13-203ENST00000427191 NPBWR1P48145 328 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 TMEM200AQ86VY9 491 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 NMNAT1Q9HAN9 279 aaPredicted RBP13.59□□□□□ -0.23
PTPN13-203ENST00000427191 ZNF223Q9UK11 482 aaPredicted RBP13.59□□□□□ -0.23
PTPN13-203ENST00000427191 ZNF281Q9Y2X9 895 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 LILRB3O75022 631 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 ACRP10323 421 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 GGT5P36269 586 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SLC14A1Q13336 389 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 ZNF439Q8NDP4 499 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 TMEM239Q8WW34 195 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SEC22CQ9BRL7 303 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 RGPD8O14715 1765 aaPredicted RBP13.59□□□□□ -0.23
PTPN13-203ENST00000427191 ZNF133P52736 654 aaPredicted RBP13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SELPLGQ14242 412 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 HNF4GQ14541 408 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 SAMD8Q96LT4 415 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 APOBEC3BQ9UH17 382 aaKnown RBP13.59□□□□□ -0.23
PTPN13-203ENST00000427191 WNT6Q9Y6F9 365 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 CEPT1Q9Y6K0 416 aa13.59□□□□□ -0.23
PTPN13-203ENST00000427191 CDK4P11802 303 aa13.58□□□□□ -0.23
PTPN13-203ENST00000427191 ZNF791Q3KP31 576 aaPredicted RBP13.58□□□□□ -0.23
PTPN13-203ENST00000427191 PLCXD3Q63HM9 321 aa13.58□□□□□ -0.23
PTPN13-203ENST00000427191 ZC3H3Q8IXZ2 948 aaKnown RBP13.58□□□□□ -0.23
PTPN13-203ENST00000427191 ZNF454Q8N9F8 522 aa13.58□□□□□ -0.23
PTPN13-203ENST00000427191 NDNFQ8TB73 568 aa13.58□□□□□ -0.23
PTPN13-203ENST00000427191 FAM174AQ8TBP5 190 aa13.58□□□□□ -0.23
PTPN13-203ENST00000427191 RELTQ969Z4 430 aa13.58□□□□□ -0.23
PTPN13-203ENST00000427191 SENP5Q96HI0 755 aaPredicted RBP13.58□□□□□ -0.23
PTPN13-203ENST00000427191 ZCCHC4Q9H5U6 513 aa13.58□□□□□ -0.23
PTPN13-203ENST00000427191 LHX6Q9UPM6 363 aa13.58□□□□□ -0.23
PTPN13-203ENST00000427191 RNGTTO60942 597 aaKnown RBP13.58□□□□□ -0.24
PTPN13-203ENST00000427191 PAN3Q58A45 887 aaKnown RBP13.58□□□□□ -0.24
PTPN13-203ENST00000427191 Q6ZVL8 140 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms