RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 CLDN24A6NM45 220 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 DIAPH2O60879 1101 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 NUDT14O95848 222 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 CHRM4P08173 479 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 CD8BP10966 210 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 ELK4P28324 431 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 SFTPDP35247 375 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 CPA2P48052 419 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 PCYT1AP49585 367 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 KHKP50053 298 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 IDH3AP50213 366 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 CARD18P57730 90 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 CBFBQ13951 182 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 FGFBP1Q14512 234 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 TMEM176BQ3YBM2 270 aaPredicted RBP16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 FAM214BQ7L5A3 538 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 HDXQ7Z353 690 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 FAM71CQ8NEG0 241 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 TOR1AIP2Q8NFQ8 470 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 ZFP90Q8TF47 636 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 MRGPRX4Q96LA9 322 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 EBF4Q9BQW3 602 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 POLDIP3Q9BY77 421 aaKnown RBP16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 QRSL1Q9H0R6 528 aaKnown RBP16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 SLC38A1Q9H2H9 487 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 PLSCR4Q9NRQ2 329 aa16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 PAQR5Q9NXK6 330 aaPredicted RBP16.41■□□□□ 0.22
SMARCAL1-205ENST00000425815 RFXANKO14593 260 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 ADAM11O75078 769 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 CYP7B1O75881 506 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 H6PDO95479 791 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 CSTAP01040 98 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 UBTFL6P0CB48 400 aaPredicted RBP16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 DNAJA1P31689 397 aaKnown RBP16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 LRRC74AQ0VAA2 488 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 GTDC1Q4AE62 458 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 EIF3MQ7L2H7 374 aaKnown RBP16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 CDC20BQ86Y33 519 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 ZNF619Q8N2I2 560 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 TRIML2Q8N7C3 387 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 PNPT1Q8TCS8 783 aaKnown RBP16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 LRRC8CQ8TDW0 803 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 ROBO4Q8WZ75 1007 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 VPS33AQ96AX1 596 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 DACH2Q96NX9 599 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 TRNT1Q96Q11 434 aaKnown RBP16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 CLEC4MQ9H2X3 399 aaPredicted RBP16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 COQ10BQ9H8M1 238 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 VIPAS39Q9H9C1 493 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 MED12LQ86YW9 2145 aa16.4■□□□□ 0.22
SMARCAL1-205ENST00000425815 SS18L1O75177 396 aaPredicted RBP16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 SASH3O75995 380 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 TGDSO95455 350 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 FCGR2AP12318 317 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 CD1EP15812 388 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 ME2P23368 584 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 CD79BP40259 229 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 MRPL19P49406 292 aaKnown RBP16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 POLR2JP52435 117 aaKnown RBP16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 SESN3P58005 492 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 KCNJ10P78508 379 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 GPAT3Q53EU6 434 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 C22orf34Q6ZV56 151 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 FUNDC1Q8IVP5 155 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 TMCO5AQ8N6Q1 288 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 ATP6V1C2Q8NEY4 427 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 OIT3Q8WWZ8 545 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 GMPPAQ96IJ6 420 aaPredicted RBP16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 WFIKKN1Q96NZ8 548 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 PRRG4Q9BZD6 226 aa16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 MCTS1Q9ULC4 181 aaKnown RBP16.39■□□□□ 0.21
SMARCAL1-205ENST00000425815 A0A1W2PPR1 153 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 SH3D21A4FU49 640 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 AGAP5A6NIR3 686 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 SYNGR4O95473 234 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 ZCCHC18P0CG32 403 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 CCKARP32238 428 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 CPOXP36551 454 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 CCR4P51679 360 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 TXNL4AP83876 142 aaKnown RBP16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 ZNF239Q16600 458 aaKnown RBP16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 TIGD2Q4W5G0 525 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 PDSS1Q5T2R2 415 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 PPP4R4Q6NUP7 873 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 LRRC74BQ6ZQY2 392 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 LSRQ86X29 649 aaPredicted RBP16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 MIER2Q8N344 545 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 GTF2H4Q92759 462 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 SLC52A3Q9NQ40 469 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 ACER3Q9NUN7 267 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 ELOVL5Q9NYP7 299 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 PROCRQ9UNN8 238 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 LIPT1Q9Y234 373 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 SLC35A3Q9Y2D2 325 aa16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 ANKHD1Q8IWZ3 2542 aaKnown RBP16.38■□□□□ 0.21
SMARCAL1-205ENST00000425815 A0A1W2PNR3 127 aa16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 FAM234BA2RU67 622 aa16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 HMGB1P1B2RPK0 211 aaPredicted RBP16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 KRT75O95678 551 aa16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 HRGP04196 525 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms