RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 XPO6Q96QU8 1125 aaKnown RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 APOL2Q9BQE5 337 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 MAP1LC3CQ9BXW4 147 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 VN1R1Q9GZP7 353 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 GBA3Q9H227 469 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 UGT1A10Q9HAW8 530 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 ACKR4Q9NPB9 350 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 CHST11Q9NPF2 352 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 GPATCH2LQ9NWQ4 482 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 ASIC5Q9NY37 505 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 STMN3Q9NZ72 180 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF319Q9P2F9 582 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 WARS2Q9UGM6 360 aaKnown RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 MAN1B1Q9UKM7 699 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 IKZF3Q9UKT9 509 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 PRG3Q9Y2Y8 225 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 TIMM22Q9Y584 194 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 OR1A2Q9Y585 309 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 V9GYQ6 96 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 RAD50Q92878 1312 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 CDHR2Q9BYE9 1310 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 A0A1W2PP11 408 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 BCLAF3A2AJT9 711 aaKnown RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 LRP5LA4QPB2 252 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 E9PQ18 207 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 F5H6K3 240 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 BLOC1S5-TXNDC5H3BN57 136 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 RHODO00212 210 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 SIRPB1O00241 398 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 PGRMC1O00264 195 aaKnown RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 GAPDHSO14556 408 aaPredicted RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 RRHO14718 337 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 PRKAB2O43741 272 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 CHST1O43916 411 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 AIREO43918 545 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 GMDSO60547 372 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 RAMP3O60896 148 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 FCN3O75636 299 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 DEXIO95424 95 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 H2AFXP16104 143 aaPredicted RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF43P17038 809 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 PGAM1P18669 254 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 AOC1P19801 751 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 RAB4AP20338 218 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 MAGP20916 626 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 KITLGP21583 273 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 DCKP27707 260 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 GABRR2P28476 465 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 RBMS1P29558 406 aaKnown RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 IFNA8P32881 189 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 KDELR2P33947 212 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ACVR1BP36896 505 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 AQP2P41181 271 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 TUFMP49411 452 aaKnown RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 COMPP49747 757 aaPredicted RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 SGSHP51688 502 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 HSPA2P54652 639 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 CDH12P55289 794 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 HNRNPH2P55795 449 aaKnown RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ACTBP60709 375 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ARF6P62330 175 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ACTA2P62736 377 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 VSNL1P62760 191 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ACTG1P63261 375 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ACTG2P63267 376 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ACTC1P68032 377 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ACTA1P68133 377 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 GHRHRQ02643 423 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 GUCY2DQ02846 1103 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 KLRC3Q07444 240 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF415Q09FC8 603 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ITGA9Q13797 1035 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 TFDP1Q14186 410 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 OPCMLQ14982 345 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ATXN7L3Q14CW9 347 aaPredicted RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 HLA-BQ31612 363 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 NDUFAF6Q330K2 333 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 MS4A18Q3C1V0 323 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 SLC22A6Q4U2R8 563 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 C2CD6Q53TS8 623 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 AWAT1Q58HT5 328 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 NEPROQ6NW34 567 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 BHLHB9Q6PI77 547 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 UNQ6126/PRO20091Q6UXV3 157 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF562Q6V9R5 426 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 TMEM64Q6YI46 380 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 Q7L0L9 218 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 BHLHA9Q7RTU4 235 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 TIPARPQ7Z3E1 657 aaKnown RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 KCNMB4Q86W47 210 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 SLC13A5Q86YT5 568 aaPredicted RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 GPALPP1Q8IXQ4 340 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF100Q8IYN0 542 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF34Q8IZ26 560 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 IQCKQ8N0W5 287 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 CENPSQ8N2Z9 138 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 DHRSXQ8N5I4 330 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 CSNK1A1LQ8N752 337 aa3.29□□□□□ -1.88
SF3B1-205ENST00000424674 PNLDC1Q8NA58 520 aaKnown RBP3.29□□□□□ -1.88
SF3B1-205ENST00000424674 TEX45Q8NA69 505 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms