RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 PABPC4LP0CB38 370 aaKnown RBP7.15□□□□□ -1.26
VIM-202ENST00000421459 LAMP1P11279 417 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 BCKDHAP12694 445 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 CPA3P15088 417 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 PRPH2P23942 346 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 EIF1P41567 113 aaKnown RBP7.15□□□□□ -1.26
VIM-202ENST00000421459 SERPINB4P48594 390 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 ZNF83P51522 516 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 CCR4P51679 360 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 CASP9P55211 416 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 DNAJB13P59910 316 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 RPS26P62854 115 aaKnown RBP7.15□□□□□ -1.26
VIM-202ENST00000421459 CHRNEQ04844 493 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 RASGEF1BQ0VAM2 473 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 TP53BP2Q13625 1128 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 QPRTQ15274 297 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 ETFDHQ16134 617 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 WHAMMP3Q1A5X7 153 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 TMEM249Q2WGJ8 235 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 KRTAP24-1Q3LI83 254 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 CHRFAM7AQ494W8 412 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 DCST2Q5T1A1 773 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 C6orf52Q5T4I8 152 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 C11orf71Q6IPW1 123 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 Q6ZT83 130 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 IL17RELQ6ZVW7 336 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 HMGN2P46Q86SG4 172 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 DTX2Q86UW9 622 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 LCA5Q86VQ0 697 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 MISPQ8IVT2 679 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 C10orf107Q8IVU9 208 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 KRTCAP2Q8N6L1 136 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 TMCO5AQ8N6Q1 288 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 ZNF525Q8N782 197 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 CCDC63Q8NA47 563 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 OR10H5Q8NGA6 315 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 OR5D16Q8NGK9 328 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 OR52N5Q8NH56 324 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 OR5AK3PQ8NH89 298 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 ZFP28Q8NHY6 868 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 ACMSDQ8TDX5 336 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 TMEM158Q8WZ71 300 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 OR5B2Q96R09 309 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 CCT7Q99832 543 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 RHNO1Q9BSD3 238 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 GATA5Q9BWX5 397 aaPredicted RBP7.15□□□□□ -1.26
VIM-202ENST00000421459 POTEKPQ9BYX7 375 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 TXLNGYQ9BZA5 131 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 TSPYL1Q9H0U9 437 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 PIGUQ9H490 435 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 ALG2Q9H553 416 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 BCO1Q9HAY6 547 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 NGBQ9NPG2 151 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 TIGARQ9NQ88 270 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 ACSS1Q9NUB1 689 aaPredicted RBP7.15□□□□□ -1.26
VIM-202ENST00000421459 OXSMQ9NWU1 459 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 DNAJC15Q9Y5T4 150 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 STAB1Q9NY15 2570 aa7.15□□□□□ -1.26
VIM-202ENST00000421459 RTTNQ86VV8 2226 aa7.15□□□□□ -1.27
VIM-202ENST00000421459 NPIPB9F8W1W9 429 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 AZIN1O14977 448 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 PIP5K1BO14986 540 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 CYTIPO60759 359 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 PEX11AO75192 247 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 GLRA3O75311 464 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 RAD51DO75771 328 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 C6orf47O95873 294 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 FESP07332 822 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 CR1P17927 2039 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 GGT1P19440 569 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 ATP6V1C1P21283 382 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 ELK4P28324 431 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 SLC7A1P30825 629 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 CCT3P49368 545 aaKnown RBP7.14□□□□□ -1.27
VIM-202ENST00000421459 NUDT6P53370 316 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 ATP12AP54707 1039 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 RAC3P60763 192 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 UGT3A2Q3SY77 523 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 TIGD2Q4W5G0 525 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 PDZK1Q5T2W1 519 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 C9orf135Q5VTT2 229 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 KANK2Q63ZY3 851 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 DNAJC14Q6Y2X3 702 aaPredicted RBP7.14□□□□□ -1.27
VIM-202ENST00000421459 TRMT10CQ7L0Y3 403 aaKnown RBP7.14□□□□□ -1.27
VIM-202ENST00000421459 TDRPQ86YL5 185 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 DDIASQ8IXT1 998 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 ZNF100Q8IYN0 542 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 C4orf33Q8N1A6 199 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 ZNF433Q8N7K0 673 aaPredicted RBP7.14□□□□□ -1.27
VIM-202ENST00000421459 OR5W2Q8NH69 310 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 AGR3Q8TD06 166 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 ADAMTS15Q8TE58 950 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 CCDC126Q96EE4 140 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 MRGPRX4Q96LA9 322 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 C3orf30Q96M34 536 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 TNFRSF13CQ96RJ3 184 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 KCNK17Q96T54 332 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 C1orf50Q9BV19 199 aa7.14□□□□□ -1.27
VIM-202ENST00000421459 THUMPD3Q9BV44 507 aaKnown RBP7.14□□□□□ -1.27
VIM-202ENST00000421459 SERHL2Q9H4I8 314 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms