RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 CDC42EP2O14613 210 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 PRODHO43272 600 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 ZNF264O43296 627 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 ADAM11O75078 769 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 IGF2P01344 180 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 PSMB9P28065 219 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 SLC6A8P48029 635 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 RNF144AP50876 292 aaPredicted RBP15.42■□□□□ 0.06
SSBP3-205ENST00000417664 NR0B1P51843 470 aaKnown RBP15.42■□□□□ 0.06
SSBP3-205ENST00000417664 PLCXD2Q0VAA5 305 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 PGGHGQ32M88 737 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 PRR23CQ6ZRP0 262 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 OR8K3Q8NH51 312 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 NUBPLQ8TB37 319 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 LRR1Q96L50 414 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 LMF1Q96S06 567 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 ADOQ96SZ5 270 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 DPH1Q9BZG8 443 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 LAT2Q9GZY6 243 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 RACGAP1Q9H0H5 632 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 APMAPQ9HDC9 416 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 RXFP3Q9NSD7 469 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 MRPS18AQ9NVS2 196 aaKnown RBP15.42■□□□□ 0.06
SSBP3-205ENST00000417664 DNAJC27Q9NZQ0 273 aa15.42■□□□□ 0.06
SSBP3-205ENST00000417664 AKAP7Q9P0M2 348 aaPredicted RBP15.42■□□□□ 0.06
SSBP3-205ENST00000417664 A0A087WUJ7 227 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 GTPBP1O00178 669 aaKnown RBP15.41■□□□□ 0.06
SSBP3-205ENST00000417664 HCN1O60741 890 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 PPM1BO75688 479 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 NTN1O95631 604 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 KLK3P07288 261 aaPredicted RBP15.41■□□□□ 0.06
SSBP3-205ENST00000417664 PNMTP11086 282 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 DBTP11182 482 aaKnown RBP15.41■□□□□ 0.06
SSBP3-205ENST00000417664 MAKP20794 623 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 PCSK6P29122 969 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 CCKBRP32239 447 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 NRG3P56975 720 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 ZNF91Q05481 1191 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 SKP2Q13309 424 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 KLHL22Q53GT1 634 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 WBP2NLQ6ICG8 309 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 MRPL14Q6P1L8 145 aaKnown RBP15.41■□□□□ 0.06
SSBP3-205ENST00000417664 TMEM205Q6UW68 189 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 KIRREL2Q6UWL6 708 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 HSDL2Q6YN16 418 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 CADM2Q8N3J6 435 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 NFAM1Q8NET5 270 aaPredicted RBP15.41■□□□□ 0.06
SSBP3-205ENST00000417664 PFN4Q8NHR9 129 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 FANK1Q8TC84 345 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 PHOSPHO1Q8TCT1 267 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 RHBDD1Q8TEB9 315 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 RFKQ969G6 155 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 YIPF6Q96EC8 236 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 TMEM80Q96HE8 168 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 PLEKHA8Q96JA3 519 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 ZNF582Q96NG8 517 aaPredicted RBP15.41■□□□□ 0.06
SSBP3-205ENST00000417664 SPSB2Q99619 263 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 LPAR4Q99677 370 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 OR52D1Q9H346 318 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 MEPEQ9NQ76 525 aaPredicted RBP15.41■□□□□ 0.06
SSBP3-205ENST00000417664 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.41■□□□□ 0.06
SSBP3-205ENST00000417664 ICAM5Q9UMF0 924 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 BAIAP2Q9UQB8 552 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 EFCAB9A8MZ26 197 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 ALG1L2C9J202 215 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 SURF4O15260 269 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 EIF4E2O60573 245 aaKnown RBP15.41■□□□□ 0.06
SSBP3-205ENST00000417664 GABARAPO95166 117 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 ABCD3P28288 659 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 GRK5P34947 590 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 PEX19P40855 299 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 RNF4P78317 190 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 CLEC12AQ5QGZ9 265 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 SMARCD3Q6STE5 483 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 SHISA6Q6ZSJ9 500 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 ZNF367Q7RTV3 350 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 MEX3DQ86XN8 651 aaKnown RBP15.41■□□□□ 0.06
SSBP3-205ENST00000417664 APCDD1LQ8NCL9 501 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 OMA1Q96E52 524 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 VMP1Q96GC9 406 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 NAA50Q9GZZ1 169 aaKnown RBP15.41■□□□□ 0.06
SSBP3-205ENST00000417664 UBQLN3Q9H347 655 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 FN3KQ9H479 309 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 SMOC1Q9H4F8 434 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 C12orf10Q9HB07 376 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 HHATLQ9HCP6 504 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 C20orf141Q9NUB4 165 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 SIGLEC7Q9Y286 467 aa15.41■□□□□ 0.06
SSBP3-205ENST00000417664 OR6C70A6NIJ9 312 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 KDM4EB2RXH2 506 aaPredicted RBP15.4■□□□□ 0.06
SSBP3-205ENST00000417664 B4E171 279 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 M0R3G1 203 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 ATE1O95260 518 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 ADORA3P0DMS8 318 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 SAGP10523 405 aaPredicted RBP15.4■□□□□ 0.06
SSBP3-205ENST00000417664 TSPAN7P41732 249 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 SLC9A3P48764 834 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 RAB40BQ12829 278 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 FAAH2Q6GMR7 532 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 SLC30A6Q6NXT4 461 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms