RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 RASGEF1BQ0VAM2 473 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 SELENBP1Q13228 472 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 MLC1Q15049 377 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 RAB35Q15286 201 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 TOMM34Q15785 309 aaPredicted RBP13.59□□□□□ -0.23
DDX56-202ENST00000415758 STK11Q15831 433 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 LRIG3Q6UXM1 1119 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 FRMD7Q6ZUT3 714 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 CNPY4Q8N129 248 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 ZNF527Q8NB42 609 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 ZNF524Q96C55 264 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 FAM120BQ96EK7 910 aaKnown RBP13.59□□□□□ -0.23
DDX56-202ENST00000415758 DHRS9Q9BPW9 319 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 TNFRSF12AQ9NP84 129 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 EMCNQ9ULC0 261 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 MGAT4BQ9UQ53 548 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 CARD8Q9Y2G2 431 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 ANK2Q01484 3957 aa13.59□□□□□ -0.23
DDX56-202ENST00000415758 IGHV3-15A0A0B4J1V0 119 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 E7EQL1 145 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 NPIPB9F8W1W9 429 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 H3BNH8 94 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 H7C417 338 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 SLC28A1O00337 649 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 SMAD9O15198 467 aaKnown RBP13.58□□□□□ -0.24
DDX56-202ENST00000415758 NUDT14O95848 222 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 HMGN2P05204 90 aaKnown RBP13.58□□□□□ -0.24
DDX56-202ENST00000415758 SDC1P18827 310 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 PTAFRP25105 342 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 CASP9P55211 416 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 CYB5R2Q6BCY4 276 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 TMEM108Q6UXF1 575 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 ZYG11AQ6WRX3 759 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 RNF165Q6ZSG1 346 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 SZRD1Q7Z422 152 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 ZNF433Q8N7K0 673 aaPredicted RBP13.58□□□□□ -0.24
DDX56-202ENST00000415758 IFT81Q8WYA0 676 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 PROX1Q92786 737 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 MTERF3Q96E29 417 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 AMBRA1Q9C0C7 1298 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 SIRT3Q9NTG7 399 aaPredicted RBP13.58□□□□□ -0.24
DDX56-202ENST00000415758 SH3BP4Q9P0V3 963 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 MALRD1Q5VYJ5 2156 aa13.58□□□□□ -0.24
DDX56-202ENST00000415758 A0A1W2PNR3 127 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 ESPNB1AK53 854 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 AKAP10O43572 662 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 EIF4E2O60573 245 aaKnown RBP13.57□□□□□ -0.24
DDX56-202ENST00000415758 DNAJA2O60884 412 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 CRCPO75575 148 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 MYL2P10916 166 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 ATP6V1C1P21283 382 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 SLC7A1P30825 629 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 ATP12AP54707 1039 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 DNAJB13P59910 316 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.57□□□□□ -0.24
DDX56-202ENST00000415758 CDC73Q6P1J9 531 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 MUC15Q8N387 334 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 ATP6V1C2Q8NEY4 427 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 MZB1Q8WU39 189 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 JADE3Q92613 823 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 CDS1Q92903 461 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 OTUB1Q96FW1 271 aaPredicted RBP13.57□□□□□ -0.24
DDX56-202ENST00000415758 TSSK3Q96PN8 268 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 ZNF300Q96RE9 604 aaPredicted RBP13.57□□□□□ -0.24
DDX56-202ENST00000415758 SHARPINQ9H0F6 387 aa13.57□□□□□ -0.24
DDX56-202ENST00000415758 ZCCHC3Q9NUD5 404 aaKnown RBP13.57□□□□□ -0.24
DDX56-202ENST00000415758 IGHV4-31P0DP07 118 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 CD40P25942 277 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 LASP1Q14847 261 aaKnown RBP13.56□□□□□ -0.24
DDX56-202ENST00000415758 PDK3Q15120 406 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 RFTN2Q52LD8 501 aaPredicted RBP13.56□□□□□ -0.24
DDX56-202ENST00000415758 ZNF544Q6NX49 715 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 GALNT5Q7Z7M9 940 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 FBXL14Q8N1E6 418 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 PIAS4Q8N2W9 510 aaPredicted RBP13.56□□□□□ -0.24
DDX56-202ENST00000415758 ZNF525Q8N782 197 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 OR2T11Q8NH01 316 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 OR5W2Q8NH69 310 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 OR2W6PQ8NHA6 318 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 C10orf105Q8TEF2 133 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 FAM168AQ92567 244 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 C19orf24Q9BVV8 132 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 HEATR1Q9H583 2144 aaKnown RBP13.56□□□□□ -0.24
DDX56-202ENST00000415758 ANKZF1Q9H8Y5 726 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 BAIAP2L1Q9UHR4 511 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 TMED5Q9Y3A6 229 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 DTNAQ9Y4J8 743 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 PTGDR2Q9Y5Y4 395 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 SLC25A15Q9Y619 301 aa13.56□□□□□ -0.24
DDX56-202ENST00000415758 NUP214P35658 2090 aaPredicted RBP13.55□□□□□ -0.24
DDX56-202ENST00000415758 IGKV3D-15A0A087WSY6 115 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 C9JVG2 144 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 GTPBP1O00178 669 aaKnown RBP13.55□□□□□ -0.24
DDX56-202ENST00000415758 ZNF264O43296 627 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 LMX1BO60663 402 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 PROCP04070 461 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 CSF3P09919 207 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 DHRS4L1P0CG22 281 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 USF1P22415 310 aaPredicted RBP13.55□□□□□ -0.24
DDX56-202ENST00000415758 ASMTP46597 345 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms