RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ZNF295-AS1Q8N0V1 137 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 DPP10Q8N608 796 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 FAM71CQ8NEG0 241 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 OR5AK3PQ8NH89 298 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 OR2V1Q8NHB1 315 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 RASSF5Q8WWW0 418 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 SMPDL3BQ92485 455 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 GTF2H4Q92759 462 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 OSTF1Q92882 214 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 NINJ1Q92982 152 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 SPDL1Q96EA4 605 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 ZNF845Q96IR2 970 aaPredicted RBP5.75□□□□□ -1.49
USP54-202ENST00000413442 ADGRG7Q96K78 797 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 TEX37Q96LM6 180 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 KLHL15Q96M94 604 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 OR52B2Q96RD2 323 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 ZNF607Q96SK3 696 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 THUMPD3Q9BV44 507 aaKnown RBP5.75□□□□□ -1.49
USP54-202ENST00000413442 SPATA9Q9BWV2 254 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 PINK1Q9BXM7 581 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 POTEKPQ9BYX7 375 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 RTN4RQ9BZR6 473 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 TRIM8Q9BZR9 551 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 UCK2Q9BZX2 261 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 TMEM38AQ9H6F2 299 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 C12orf10Q9HB07 376 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 FBXO34Q9NWN3 711 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 PARPBPQ9NWS1 579 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 ZNF226Q9NYT6 803 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 TNFRSF10DQ9UBN6 386 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 LEF1Q9UJU2 399 aaPredicted RBP5.75□□□□□ -1.49
USP54-202ENST00000413442 MKLN1Q9UL63 735 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 CARD8Q9Y2G2 431 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 NDUFAF1Q9Y375 327 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 KCNE3Q9Y6H6 103 aa5.75□□□□□ -1.49
USP54-202ENST00000413442 INTS1Q8N201 2190 aaKnown RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 DSPPQ9NZW4 1301 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 RELNP78509 3460 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 UQCRHLA0A096LP55 91 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 A0A1W2PNV4 684 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 HTR3EA5X5Y0 456 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 OR6C65A6NJZ3 312 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 FAM90A27PA6NNH2 459 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 ZNF724A8MTY0 619 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 C5orf58C9J3I9 102 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 C16orf97H3BN30 126 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 NDUFAB1O14561 156 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 EIF1AYO14602 144 aaKnown RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 SS18L1O75177 396 aaPredicted RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 TNFSF13O75888 250 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 VAMP5O95183 116 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 PMS2P2O95744 297 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 PLGP00747 810 aaPredicted RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 C8BP07358 591 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 YES1P07947 543 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 SNRPB2P08579 225 aaKnown RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 RPS4Y1P22090 263 aaKnown RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 COL8A1P27658 744 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 GRNP28799 593 aaKnown RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 SLC7A1P30825 629 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 UQCRC1P31930 480 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 CD79BP40259 229 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 SLC1A3P43003 542 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 CRATP43155 626 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 KIR2DL2P43627 348 aaPredicted RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 EIF1AXP47813 144 aaKnown RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 CPA2P48052 419 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 AGFG1P52594 562 aaKnown RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 SUCLG1P53597 346 aaKnown RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 MVDP53602 400 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 DSTNP60981 165 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 COPZ1P61923 177 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 TLE4Q04727 773 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 STX5Q13190 355 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 SKP2Q13309 424 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 CYLC2Q14093 348 aaPredicted RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 P2RY6Q15077 328 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 PON3Q15166 354 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 QPRTQ15274 297 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 GUSBP1Q15486 140 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 CD226Q15762 336 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 LIN52Q52LA3 116 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 TMEM201Q5SNT2 666 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 C6orf10Q5SRN2 563 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 CCNJQ5T5M9 372 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 RNF220Q5VTB9 566 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 REEP3Q6NUK4 255 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 CBLN3Q6UW01 205 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 FRRS1Q6ZNA5 592 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 TMPPEQ6ZT21 453 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 NET1Q7Z628 596 aaPredicted RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 MTDHQ86UE4 582 aaKnown RBP5.74□□□□□ -1.49
USP54-202ENST00000413442 GGNQ86UU5 652 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 P2RY8Q86VZ1 359 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 RNF130Q86XS8 419 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 UBQLNLQ8IYU4 475 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 RPRMLQ8N4K4 120 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 C9orf106Q8NAJ2 232 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 OR5D16Q8NGK9 328 aa5.74□□□□□ -1.49
USP54-202ENST00000413442 OR52P1PQ8NH57 321 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms