RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ADGRL4Q9HBW9 690 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 SPATA2Q9UM82 520 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 SLC35A3Q9Y2D2 325 aa16.36■□□□□ 0.21
SDCBP-202ENST00000413219 CIB4A0PJX0 185 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 CDHR4A6H8M9 788 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 FLRT2O43155 660 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 SCO1O75880 301 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 ARL6IP5O75915 188 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 CXCL14O95715 111 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 SYPP08247 313 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 ATF1P18846 271 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 CERS1P27544 350 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 CDK3Q00526 305 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 POU4F2Q12837 409 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 ELAVL3Q14576 367 aaKnown RBP16.35■□□□□ 0.21
SDCBP-202ENST00000413219 AGERQ15109 404 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 TMPRSS11FQ6ZWK6 438 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 TMEM239Q8WW34 195 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 GHSRQ92847 366 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 MSANTD3Q96H12 275 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 LCORQ96JN0 433 aaPredicted RBP16.35■□□□□ 0.21
SDCBP-202ENST00000413219 GSX2Q9BZM3 304 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 SPRTNQ9H040 489 aaPredicted RBP16.35■□□□□ 0.21
SDCBP-202ENST00000413219 C20orf85Q9H1P6 137 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 PLEKHA1Q9HB21 404 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 MRPS30Q9NP92 439 aaKnown RBP16.35■□□□□ 0.21
SDCBP-202ENST00000413219 ST6GALNAC2Q9UJ37 374 aa16.35■□□□□ 0.21
SDCBP-202ENST00000413219 G3V3Q6 166 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 CDK2AP1O14519 115 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 KHNYNO15037 678 aaKnown RBP16.34■□□□□ 0.21
SDCBP-202ENST00000413219 MT-ND4P03905 459 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 WNT1P04628 370 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 ANKRD34CP0C6C1 535 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 ADH5P11766 374 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 SNRPBP14678 240 aaKnown RBP16.34■□□□□ 0.21
SDCBP-202ENST00000413219 SSTR2P30874 369 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 FNDC3BQ53EP0 1204 aaKnown RBP16.34■□□□□ 0.21
SDCBP-202ENST00000413219 NLRC3Q7RTR2 1065 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 GPAT4Q86UL3 456 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 SLC16A11Q8NCK7 471 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 FAM71CQ8NEG0 241 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 OR2T35Q8NGX2 323 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 KAT2AQ92830 837 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 DACT3Q96B18 629 aaPredicted RBP16.34■□□□□ 0.21
SDCBP-202ENST00000413219 VWCEQ96DN2 955 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 GSDMCQ9BYG8 508 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 ENKD1Q9H0I2 346 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 EVA1BQ9NVM1 165 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 AKAP7Q9P0M2 348 aaPredicted RBP16.34■□□□□ 0.21
SDCBP-202ENST00000413219 RPS6KB2Q9UBS0 482 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 KIF25Q9UIL4 384 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 BAIAP2Q9UQB8 552 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 A0A1B0GTQ1 180 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 RIIAD1A6NNX1 92 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 M0R233 179 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 OGG1O15527 345 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 LYPD3O95274 346 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 STATHP02808 62 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 RHOP08100 348 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 ACVR1BP36896 505 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 OR12D2P58182 307 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 DHODHQ02127 395 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 MLF2Q15773 248 aaPredicted RBP16.34■□□□□ 0.21
SDCBP-202ENST00000413219 OVCH1Q7RTY7 1134 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 CDK20Q8IZL9 346 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 ZNF527Q8NB42 609 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 CEP76Q8TAP6 659 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 SMPDL3BQ92485 455 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 CDS1Q92903 461 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 INSM2Q96T92 566 aaPredicted RBP16.34■□□□□ 0.21
SDCBP-202ENST00000413219 MACROD1Q9BQ69 325 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 SLC6A20Q9NP91 592 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 BRD7Q9NPI1 651 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 NANSQ9NR45 359 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 ZNF224Q9NZL3 707 aa16.34■□□□□ 0.21
SDCBP-202ENST00000413219 MRPS7Q9Y2R9 242 aaKnown RBP16.34■□□□□ 0.21
SDCBP-202ENST00000413219 HEATR5BQ9P2D3 2071 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 NAP1L6A6NFF2 107 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 GPR89AB7ZAQ6 455 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 GATBO75879 557 aaKnown RBP16.33■□□□□ 0.21
SDCBP-202ENST00000413219 CD1AP06126 327 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 GPR89BP0CG08 455 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 PRG2P13727 222 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 NT5EP21589 574 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 SOX9P48436 509 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 VSX2P58304 361 aaPredicted RBP16.33■□□□□ 0.21
SDCBP-202ENST00000413219 DEFB103AP81534 67 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 LTB4RQ15722 352 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 RNASE12Q5GAN4 147 aaKnown RBP16.33■□□□□ 0.21
SDCBP-202ENST00000413219 UBE2NLQ5JXB2 153 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 ELFN2Q5R3F8 820 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 BEST4Q8NFU0 473 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 RBPMSQ93062 196 aaKnown RBP16.33■□□□□ 0.21
SDCBP-202ENST00000413219 RAB7BQ96AH8 199 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 IFT27Q9BW83 186 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 OR51V1Q9H2C8 321 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 CLDND1Q9NY35 253 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 POMT2Q9UKY4 750 aa16.33■□□□□ 0.21
SDCBP-202ENST00000413219 HTTP42858 3142 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 ABHD14A-ACY1A0A1B0GW23 586 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms