RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 RNF144AP50876 292 aaPredicted RBP14.79□□□□□ -0.04
MRPL55-220ENST00000411464 DSCR9P59020 149 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 RPL38P63173 70 aaKnown RBP14.79□□□□□ -0.04
MRPL55-220ENST00000411464 RASGEF1BQ0VAM2 473 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 MLC1Q15049 377 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 TOMM34Q15785 309 aaPredicted RBP14.79□□□□□ -0.04
MRPL55-220ENST00000411464 EXOSC6Q5RKV6 272 aaKnown RBP14.79□□□□□ -0.04
MRPL55-220ENST00000411464 TIMM23BQ5SRD1 257 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 Q6ZSR9 355 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 P2RY8Q86VZ1 359 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 ZNF100Q8IYN0 542 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 CCDC63Q8NA47 563 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 RFWD2Q8NHY2 731 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 ZNF775Q96BV0 537 aaPredicted RBP14.79□□□□□ -0.04
MRPL55-220ENST00000411464 FCRL1Q96LA6 429 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 PSD2Q9BQI7 771 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 OXSMQ9NWU1 459 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 PRSS50Q9UI38 385 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 CDC42EP3Q9UKI2 254 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 TMED5Q9Y3A6 229 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 FIS1Q9Y3D6 152 aa14.79□□□□□ -0.04
MRPL55-220ENST00000411464 IGHV4-30-2A0A087WSY4 118 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 NPIPA5A0A0B4J1W7 369 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 A0A1W2PNR3 127 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 A0A1W2PPM1 405 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 FAM234BA2RU67 622 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 NPIPA7E9PJI5 369 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 AZIN1O14977 448 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 PHF1O43189 567 aaPredicted RBP14.78□□□□□ -0.04
MRPL55-220ENST00000411464 LINC00032P0C843 101 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 NPIPA8P0DM63 369 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 CPA3P15088 417 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 ATP12AP54707 1039 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 SELENBP1Q13228 472 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 CDC73Q6P1J9 531 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 CLEC2AQ6UVW9 174 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 GALNT5Q7Z7M9 940 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 ZNF614Q8N883 585 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 TOR1AIP2Q8NFQ8 470 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 OR2T11Q8NH01 316 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 ADAMTS15Q8TE58 950 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 ACTRT3Q9BYD9 372 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 ING1Q9UK53 422 aaPredicted RBP14.78□□□□□ -0.04
MRPL55-220ENST00000411464 POU2F3Q9UKI9 436 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 FAF1Q9UNN5 650 aaPredicted RBP14.78□□□□□ -0.04
MRPL55-220ENST00000411464 DTNAQ9Y4J8 743 aa14.78□□□□□ -0.04
MRPL55-220ENST00000411464 PLIN3O60664 434 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 CYTIPO60759 359 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 KRT16P08779 473 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 CCT3P49368 545 aaKnown RBP14.77□□□□□ -0.05
MRPL55-220ENST00000411464 RAB35Q15286 201 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 NDUFAF6Q330K2 333 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 SPDYE7PQ495Y7 208 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 GALNTL6Q49A17 601 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 ARL13AQ5H913 290 aaPredicted RBP14.77□□□□□ -0.05
MRPL55-220ENST00000411464 DCST2Q5T1A1 773 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.77□□□□□ -0.05
MRPL55-220ENST00000411464 C6orf52Q5T4I8 152 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 TMEM108Q6UXF1 575 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 TMCO5AQ8N6Q1 288 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 OR10H5Q8NGA6 315 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 OR5W2Q8NH69 310 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 MZB1Q8WU39 189 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 C16orf45Q96MC5 204 aaPredicted RBP14.77□□□□□ -0.05
MRPL55-220ENST00000411464 OR5B2Q96R09 309 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 TNFRSF13CQ96RJ3 184 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 KCNK17Q96T54 332 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 CACNG6Q9BXT2 260 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 BEX2Q9BXY8 128 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 ANKZF1Q9H8Y5 726 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 SIRT3Q9NTG7 399 aaPredicted RBP14.77□□□□□ -0.05
MRPL55-220ENST00000411464 ABCA1O95477 2261 aa14.77□□□□□ -0.05
MRPL55-220ENST00000411464 PRR14LQ5THK1 2151 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 OR5H1A6NKK0 313 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 ZNF724A8MTY0 619 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 LSM1O15116 133 aaKnown RBP14.76□□□□□ -0.05
MRPL55-220ENST00000411464 SMAD9O15198 467 aaKnown RBP14.76□□□□□ -0.05
MRPL55-220ENST00000411464 ZNF264O43296 627 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 EIF4E2O60573 245 aaKnown RBP14.76□□□□□ -0.05
MRPL55-220ENST00000411464 PGM3O95394 542 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 BCKDHAP12694 445 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 IGHV1-2P23083 117 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 TTKP33981 857 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 HPCAL1P37235 193 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 RPL3P39023 403 aaKnown RBP14.76□□□□□ -0.05
MRPL55-220ENST00000411464 CCR4P51679 360 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 IRX1P78414 480 aaPredicted RBP14.76□□□□□ -0.05
MRPL55-220ENST00000411464 TP53BP2Q13625 1128 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 CBFBQ13951 182 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 QPRTQ15274 297 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 TMEM249Q2WGJ8 235 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 SLC25A53Q5H9E4 307 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 LIPMQ5VYY2 423 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 C3orf33Q6P1S2 294 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 SLC22A25Q6T423 547 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.76□□□□□ -0.05
MRPL55-220ENST00000411464 HOMEZQ8IX15 550 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 FBXL14Q8N1E6 418 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 DEPDC4Q8N2C3 294 aa14.76□□□□□ -0.05
MRPL55-220ENST00000411464 UBE2J2Q8N2K1 259 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms