RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 DHX35Q9H5Z1 703 aaKnown RBP-1.19□□□□□ -2.6
RNU4-61P-201ENST00000411243 ZDHHC11Q9H8X9 412 aa-1.19□□□□□ -2.6
RNU4-61P-201ENST00000411243 PREBQ9HCU5 417 aa-1.19□□□□□ -2.6
RNU4-61P-201ENST00000411243 WASH6PQ9NQA3 447 aa-1.19□□□□□ -2.6
RNU4-61P-201ENST00000411243 CWC25Q9NXE8 425 aaPredicted RBP-1.19□□□□□ -2.6
RNU4-61P-201ENST00000411243 TBC1D7Q9P0N9 293 aa-1.19□□□□□ -2.6
RNU4-61P-201ENST00000411243 CHORDC1Q9UHD1 332 aaPredicted RBP-1.19□□□□□ -2.6
RNU4-61P-201ENST00000411243 JPT1Q9UK76 154 aa-1.19□□□□□ -2.6
RNU4-61P-201ENST00000411243 THSD7BQ9C0I4 1608 aa-1.19□□□□□ -2.6
RNU4-61P-201ENST00000411243 MYO15AQ9UKN7 3530 aa-1.19□□□□□ -2.6
RNU4-61P-201ENST00000411243 SCN4AP35499 1836 aa-1.19□□□□□ -2.6
RNU4-61P-201ENST00000411243 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 CPAMD8Q8IZJ3 1885 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 TMEM131Q92545 1883 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 PLXNA4Q9HCM2 1894 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 SPENQ96T58 3664 aaKnown RBP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 LAMC3Q9Y6N6 1575 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 DOCK8Q8NF50 2099 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 AKAP9Q99996 3911 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 TNS2Q63HR2 1409 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 IGLV1-36A0A0B4J1U3 117 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 A8MUI8 341 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 F5H0A9 414 aaPredicted RBP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 H3BRN7 92 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 SIVA1O15304 175 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 AQP9O43315 295 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 SOX15O60248 233 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 SHOX2O60902 331 aaPredicted RBP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 SRP72O76094 671 aaKnown RBP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 YIF1AO95070 293 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 PARNO95453 639 aaKnown RBP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 SLC16A8O95907 504 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 NPPAP01160 153 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 LAMP2P13473 410 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 PTAFRP25105 342 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 SSTR1P30872 391 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 MAGEA12P43365 314 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 HCCSP53701 268 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 NAP1L1P55209 391 aaKnown RBP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 RBX1P62877 108 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 RPL8P62917 257 aaKnown RBP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 MT1XP80297 61 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 PRKCDQ05655 676 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 C2orf54Q08AI8 447 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 IRF3Q14653 427 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 ZNF77Q15935 545 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 SLC5A12Q1EHB4 618 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 NDUFAF6Q330K2 333 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 MAP9Q49MG5 647 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 ITPRIPL1Q6GPH6 555 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 LCN12Q6JVE5 192 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 CLEC18BQ6UXF7 455 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 CYHR1Q6ZMK1 362 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 CYS1Q717R9 158 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 ABHD13Q7L211 337 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 KBTBD6Q86V97 674 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 MED12LQ86YW9 2145 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 CCAR2Q8N163 923 aaKnown RBP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 FAM86B1Q8N7N1 296 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 TC2NQ8N9U0 490 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 Q8NAQ8 132 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 DCANP1Q8TF63 244 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 PLAC4Q8WY50 150 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 MRPL24Q96A35 216 aaKnown RBP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 TMIGD2Q96BF3 282 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 ZNF707Q96C28 371 aaPredicted RBP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 Q96NJ1 140 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 TM2D1Q9BX74 207 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 RAB34Q9BZG1 259 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 MTIF3Q9H2K0 278 aaKnown RBP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 RPP21Q9H633 154 aaKnown RBP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 DMAP1Q9NPF5 467 aaPredicted RBP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 FAM212BQ9NTI7 297 aaPredicted RBP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 MED9Q9NWA0 146 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 ATP6V1HQ9UI12 483 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 IFT52Q9Y366 437 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 ASB3Q9Y575 518 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 ACACBO00763 2458 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 SPTBN1Q01082 2364 aaKnown RBP-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 ZFHX3Q15911 3703 aa-1.2□□□□□ -2.6
RNU4-61P-201ENST00000411243 PLEKHG2Q9H7P9 1386 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 ADAMTSL1Q8N6G6 1762 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 TLN1Q9Y490 2541 aaKnown RBP-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 LOC100509620A0A075B734 347 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 A0A087WSZ3 146 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 ILVBLA1L0T0 632 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 TUBAL3A6NHL2 446 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 KNCNA6PVL3 124 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 TMEM150CB9EJG8 249 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 C19orf84I3L1E1 186 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 UPK2O00526 184 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 SLC22A1O15245 554 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 PPM1GO15355 546 aaPredicted RBP-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 CD5LO43866 347 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 VAMP5O95183 116 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 IL4P05112 153 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 ASGR1P07306 291 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 MT1BP07438 61 aa-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 VIMP08670 466 aaKnown RBP-1.21□□□□□ -2.6
RNU4-61P-201ENST00000411243 TLX1NBP0CAT3 122 aa-1.21□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms