RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 GALNT9Q9HCQ5 603 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 MCUBQ9NWR8 336 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 C2orf42Q9NWW7 574 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 ACTR10Q9NZ32 417 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 CD207Q9UJ71 328 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 ING1Q9UK53 422 aaPredicted RBP12.44□□□□□ -0.42
COL6A2-204ENST00000409416 C17orf113A0A1B0GUU1 675 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 A0A1W2PPV9 198 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 A0A1W2PQ72 361 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 TSPAN11A1L157 253 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 GABRPO00591 440 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 LGI1O95970 557 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 GSTM3P21266 225 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 REEP5Q00765 189 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 HHEXQ03014 270 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 ST3GAL3Q11203 375 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 MAPK14Q16539 360 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 NDUFA9Q16795 377 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 C19orf48Q6RUI8 117 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 NRROSQ86YC3 692 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 KDM8Q8N371 416 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 PHOSPHO1Q8TCT1 267 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 ERMAPQ96PL5 475 aaPredicted RBP12.44□□□□□ -0.42
COL6A2-204ENST00000409416 C20orf141Q9NUB4 165 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 ZNF222Q9UK12 451 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 PLA2G10O15496 165 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 AKR7A2O43488 359 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 CDC40O60508 579 aaKnown RBP eCLIP12.44□□□□□ -0.42
COL6A2-204ENST00000409416 TP53P04637 393 aaPredicted RBP12.44□□□□□ -0.42
COL6A2-204ENST00000409416 LIMS3P0CW19 117 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 LIMS4P0CW20 117 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 UGT2B7P16662 529 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 CTHP32929 405 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 TALDO1P37837 337 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 HTR2BP41595 481 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 EIF1AXP47813 144 aaKnown RBP12.44□□□□□ -0.42
COL6A2-204ENST00000409416 PUS10Q3MIT2 529 aaKnown RBP12.44□□□□□ -0.42
COL6A2-204ENST00000409416 OAFQ86UD1 273 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 LRRC17Q8N6Y2 441 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 ZNF655Q8N720 491 aaPredicted RBP12.44□□□□□ -0.42
COL6A2-204ENST00000409416 GDPD1Q8N9F7 314 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 TP53I13Q8NBR0 393 aaPredicted RBP12.44□□□□□ -0.42
COL6A2-204ENST00000409416 OR52E2Q8NGJ4 325 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 ELP4Q96EB1 424 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 GSDMCQ9BYG8 508 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 SLC25A18Q9H1K4 315 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 PELI2Q9HAT8 420 aa12.44□□□□□ -0.42
COL6A2-204ENST00000409416 MN1Q10571 1320 aaPredicted RBP12.43□□□□□ -0.42
COL6A2-204ENST00000409416 TVP23AA6NH52 213 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 TSPAN4O14817 238 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 LYRM1O43325 122 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 AKAP8O43823 692 aaKnown RBP12.43□□□□□ -0.42
COL6A2-204ENST00000409416 EPPINO95925 133 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 RAB40BQ12829 278 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 SUZ12Q15022 739 aaKnown RBP12.43□□□□□ -0.42
COL6A2-204ENST00000409416 TMEM201Q5SNT2 666 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 SAMD12Q8N8I0 201 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 OR52R1Q8NGF1 315 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 OR4Q3Q8NH05 313 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 SLC37A2Q8TED4 501 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 CNOT9Q92600 299 aaKnown RBP12.43□□□□□ -0.42
COL6A2-204ENST00000409416 TRAPPC4Q9Y296 219 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 SLC6A5Q9Y345 797 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 ADAM18Q9Y3Q7 739 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 HLA-DPB1P04440 258 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 F13BP05160 661 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 DDOSTP39656 456 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 TPMTP51580 245 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 FUT5Q11128 374 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 GNA13Q14344 377 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 LPAL2Q16609 132 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 C3orf38Q5JPI3 329 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 C16orf47Q6ZP98 133 aaPredicted RBP12.43□□□□□ -0.42
COL6A2-204ENST00000409416 DNAJC5GQ8N7S2 189 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 SLC37A3Q8NCC5 494 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 MORN4Q8NDC4 146 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 TMEM52Q8NDY8 209 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 FANK1Q8TC84 345 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 RFKQ969G6 155 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 CHIAQ9BZP6 476 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 PCBD2Q9H0N5 130 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 LMAN2LQ9H0V9 348 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 B3GAT2Q9NPZ5 323 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 ACSS1Q9NUB1 689 aaPredicted RBP12.43□□□□□ -0.42
COL6A2-204ENST00000409416 NFKBIL1Q9UBC1 381 aaPredicted RBP12.43□□□□□ -0.42
COL6A2-204ENST00000409416 EXOSC1Q9Y3B2 195 aaKnown RBP12.43□□□□□ -0.42
COL6A2-204ENST00000409416 IGHV3-20A0A0C4DH32 117 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 CPED1A4D0V7 1026 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 ST6GAL1P15907 406 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 PPP3R1P63098 170 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 GLYR1Q49A26 553 aaPredicted RBP12.43□□□□□ -0.42
COL6A2-204ENST00000409416 PXDC1Q5TGL8 231 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 C1orf94Q6P1W5 598 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 MZT2AQ6P582 158 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 CLDN22Q8N7P3 220 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 OR4C6Q8NH72 309 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 SNX33Q8WV41 574 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 MRGPRX1Q96LB2 322 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 AICDAQ9GZX7 198 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms