RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 RELL2Q8NC24 303 aaPredicted RBP7.75□□□□□ -1.17
SNX13-201ENST00000409076 GALNT11Q8NCW6 608 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 SUN3Q8TAQ9 357 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 RSPRY1Q96DX4 576 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 PEX11GQ96HA9 241 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 NMNAT3Q96T66 252 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 TMEM38AQ9H6F2 299 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 APOBEC3BQ9UH17 382 aaKnown RBP7.75□□□□□ -1.17
SNX13-201ENST00000409076 COPS3Q9UNS2 423 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 NOTCH4Q99466 2003 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 LOC285556D6RIA3 1793 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 CACNA1GO43497 2377 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 POM121BA6NF01 834 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 H3BUI4 141 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 ALX3O95076 343 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 EML2O95834 649 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 RPN2P04844 631 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 H2AFB2P0C5Z0 115 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 RAB3BP20337 219 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 ERP29P30040 261 aaKnown RBP7.74□□□□□ -1.17
SNX13-201ENST00000409076 GDI1P31150 447 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 EPHA5P54756 1037 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 P2RX3P56373 397 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 PPP1CAP62136 330 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 KCNC3Q14003 757 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 GAS6Q14393 721 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 IRF4Q15306 451 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 C4orf46Q504U0 113 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 SFXN4Q6P4A7 337 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 MSANTD1Q6ZTZ1 278 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 SLC35D2Q76EJ3 337 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 UBE2Q1Q7Z7E8 422 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 ZAR1Q86SH2 424 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 FAM109AQ8N4B1 249 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 TSEN15Q8WW01 171 aaKnown RBP7.74□□□□□ -1.17
SNX13-201ENST00000409076 CNOT9Q92600 299 aaKnown RBP7.74□□□□□ -1.17
SNX13-201ENST00000409076 SMARCD2Q92925 531 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 SPACA7Q96KW9 195 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 PHPT1Q9NRX4 125 aaPredicted RBP7.74□□□□□ -1.17
SNX13-201ENST00000409076 DIMT1Q9UNQ2 313 aaKnown RBP7.74□□□□□ -1.17
SNX13-201ENST00000409076 MRPS2Q9Y399 296 aaKnown RBP7.74□□□□□ -1.17
SNX13-201ENST00000409076 MDC1Q14676 2089 aaKnown RBP7.74□□□□□ -1.17
SNX13-201ENST00000409076 KCNAB3O43448 404 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 RDH16O75452 317 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 RGS9O75916 674 aaPredicted RBP7.74□□□□□ -1.17
SNX13-201ENST00000409076 OR7A10O76100 309 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 IL1AP01583 271 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 ENPP1P22413 925 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 BMP8BP34820 402 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 NOGQ13253 232 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 SFRP5Q5T4F7 317 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 NHLRC1Q6VVB1 395 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 BMP8AQ7Z5Y6 402 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 CASTOR1Q8WTX7 329 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 ZDHHC1Q8WTX9 485 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 SNX18Q96RF0 628 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 PDCD10Q9BUL8 212 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 POLDIP3Q9BY77 421 aaKnown RBP7.74□□□□□ -1.17
SNX13-201ENST00000409076 CPEB1Q9BZB8 566 aaKnown RBP7.74□□□□□ -1.17
SNX13-201ENST00000409076 ACOXLQ9NUZ1 547 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 SPTBN5Q9NRC6 3674 aaKnown RBP7.74□□□□□ -1.17
SNX13-201ENST00000409076 IGLV3-16A0A075B6K0 115 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 C2orf72A6NCS6 295 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 M0R233 179 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 UGDHO60701 494 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 SLC35G6P0C7Q6 338 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 PITPNBP48739 271 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 GZMKP49863 264 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 PCBP3P57721 371 aaKnown RBP7.74□□□□□ -1.17
SNX13-201ENST00000409076 LGALS3BPQ08380 585 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 FAM74A1Q5RGS3 127 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 MEDAGQ5VYS4 303 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 METTL3Q86U44 580 aaKnown RBP7.74□□□□□ -1.17
SNX13-201ENST00000409076 NR2C2APQ86WQ0 139 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 OR6N2Q8NGY6 317 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 OR2L2Q8NH16 312 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 TRMT2BQ96GJ1 504 aaKnown RBP7.74□□□□□ -1.17
SNX13-201ENST00000409076 ARPC5LQ9BPX5 153 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 NRSN2Q9GZP1 204 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 ARL6Q9H0F7 186 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 LMAN2LQ9H0V9 348 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 TMEM27Q9HBJ8 222 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 MAN2C1Q9NTJ4 1040 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 SATB2Q9UPW6 733 aa7.74□□□□□ -1.17
SNX13-201ENST00000409076 EXOSC1Q9Y3B2 195 aaKnown RBP7.74□□□□□ -1.17
SNX13-201ENST00000409076 A0A1B0GV50 99 aa7.73□□□□□ -1.17
SNX13-201ENST00000409076 TCRBV16S1A1N1A0A5B0 115 aa7.73□□□□□ -1.17
SNX13-201ENST00000409076 LRIT2A6NDA9 550 aa7.73□□□□□ -1.17
SNX13-201ENST00000409076 B4DGG1 531 aa7.73□□□□□ -1.17
SNX13-201ENST00000409076 L7N2F9 121 aa7.73□□□□□ -1.17
SNX13-201ENST00000409076 EMC8O43402 210 aa7.73□□□□□ -1.17
SNX13-201ENST00000409076 ANXA3P12429 323 aa7.73□□□□□ -1.17
SNX13-201ENST00000409076 POU3F2P20265 443 aaPredicted RBP7.73□□□□□ -1.17
SNX13-201ENST00000409076 ATP5A1P25705 553 aaKnown RBP7.73□□□□□ -1.17
SNX13-201ENST00000409076 STAT5AP42229 794 aa7.73□□□□□ -1.17
SNX13-201ENST00000409076 SLC7A9P82251 487 aa7.73□□□□□ -1.17
SNX13-201ENST00000409076 OR1Q1Q15612 314 aa7.73□□□□□ -1.17
SNX13-201ENST00000409076 RPE65Q16518 533 aa7.73□□□□□ -1.17
SNX13-201ENST00000409076 FAM69AQ5T7M9 428 aa7.73□□□□□ -1.17
SNX13-201ENST00000409076 B3GNTL1Q67FW5 361 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 199.6 ms