RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 TRIM36Q9NQ86 728 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 ZNF221Q9UK13 617 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 ITGB1BP2Q9UKP3 347 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 BAIAP2Q9UQB8 552 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 SLC35A3Q9Y2D2 325 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 SCN2AQ99250 2005 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 RANBP2P49792 3224 aaKnown RBP15.55■□□□□ 0.08
NUP50-203ENST00000407019 PTP4A3O75365 173 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 CTSBP07858 339 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 GUSBP08236 651 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 S1PR1P21453 382 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 RBM34P42696 430 aaKnown RBP15.55■□□□□ 0.08
NUP50-203ENST00000407019 RPS5P46782 204 aaKnown RBP15.55■□□□□ 0.08
NUP50-203ENST00000407019 EMDP50402 254 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 SLC16A1P53985 500 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 MADCAM1Q13477 382 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 METAP1DQ6UB28 335 aaPredicted RBP15.55■□□□□ 0.08
NUP50-203ENST00000407019 OR4C6Q8NH72 309 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 ZDHHC1Q8WTX9 485 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 PTCHD1Q96NR3 888 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 TIMP4Q99727 224 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 SOSTQ9BQB4 213 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 TRIM2Q9C040 744 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 RNF32Q9H0A6 362 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 OR51V1Q9H2C8 321 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 DNAJB12Q9NXW2 375 aaKnown RBP15.55■□□□□ 0.08
NUP50-203ENST00000407019 A8MU76 341 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 REM1O75628 298 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 PPP1R3DO95685 299 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 ZNF3P17036 446 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 APEX1P27695 318 aaKnown RBP15.55■□□□□ 0.08
NUP50-203ENST00000407019 MTNR1BP49286 362 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 NKX2-5P52952 324 aaPredicted RBP15.55■□□□□ 0.08
NUP50-203ENST00000407019 CCINQ13939 588 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 LCN1P1Q5VSP4 162 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 FCRLBQ6BAA4 426 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 DNAJC5GQ8N7S2 189 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 OR6F1Q8NGZ6 308 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 TOE1Q96GM8 510 aaKnown RBP15.55■□□□□ 0.08
NUP50-203ENST00000407019 DEPDC7Q96QD5 511 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 GAS2L1Q99501 681 aaPredicted RBP15.55■□□□□ 0.08
NUP50-203ENST00000407019 TEAD3Q99594 435 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 MMP28Q9H239 520 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 HCN3Q9P1Z3 774 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 ADAM30Q9UKF2 790 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 NDRG2Q9UN36 371 aaKnown RBP15.55■□□□□ 0.08
NUP50-203ENST00000407019 CYP8B1Q9UNU6 501 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 SIRT4Q9Y6E7 314 aaPredicted RBP15.55■□□□□ 0.08
NUP50-203ENST00000407019 XIRP2A4UGR9 3374 aa15.55■□□□□ 0.08
NUP50-203ENST00000407019 A0A0A6YYC8 382 aaPredicted RBP15.54■□□□□ 0.08
NUP50-203ENST00000407019 B4DGG1 531 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 I3L1I5 382 aaPredicted RBP15.54■□□□□ 0.08
NUP50-203ENST00000407019 IGKV1D-16P01601 117 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 MT-ND5P03915 603 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 HK1P19367 917 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 PTBP1P26599 531 aaKnown RBP eCLIP15.54■□□□□ 0.08
NUP50-203ENST00000407019 LTBRP36941 435 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 NR4A2P43354 598 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 ALG10BQ5I7T1 473 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 OAFQ86UD1 273 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 MCATQ8IVS2 390 aaKnown RBP15.54■□□□□ 0.08
NUP50-203ENST00000407019 AVL9Q8NBF6 648 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 OR4N2Q8NGD1 307 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 RIT1Q92963 219 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 CTRCQ99895 268 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 NDC1Q9BTX1 674 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 ZNF426Q9BUY5 554 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 PPP1R3EQ9H7J1 279 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 SYNDIG1Q9H7V2 258 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 GPR27Q9NS67 375 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.54■□□□□ 0.08
NUP50-203ENST00000407019 MALT1Q9UDY8 824 aa15.54■□□□□ 0.08
NUP50-203ENST00000407019 MEIOCA2RUB1 952 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 TFECO14948 347 aaPredicted RBP15.53■□□□□ 0.08
NUP50-203ENST00000407019 ADAM11O75078 769 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 IGLV3-19P01714 112 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 MRPL3P09001 348 aaKnown RBP15.53■□□□□ 0.08
NUP50-203ENST00000407019 SLC2A2P11168 524 aaPredicted RBP15.53■□□□□ 0.08
NUP50-203ENST00000407019 RNH1P13489 461 aaKnown RBP15.53■□□□□ 0.08
NUP50-203ENST00000407019 SLC2A5P22732 501 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 NOS3P29474 1203 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 SLC6A6P31641 620 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 ACAA2P42765 397 aaKnown RBP15.53■□□□□ 0.08
NUP50-203ENST00000407019 EVX1P49640 407 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 STX4Q12846 297 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 CRMP1Q14194 572 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 PRTGQ2VWP7 1150 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 TRIQKQ629K1 86 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 GPALPP1Q8IXQ4 340 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 RDH10Q8IZV5 341 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 SLC43A2Q8N370 569 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 OR5W2Q8NH69 310 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 PHOX2BQ99453 314 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 ADGRL4Q9HBW9 690 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 NEK6Q9HC98 313 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 HTR3EA5X5Y0 456 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 DVL2O14641 736 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 SLC19A2O60779 497 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 HLA-DQB1P01920 261 aa15.53■□□□□ 0.08
NUP50-203ENST00000407019 SBK2P0C263 348 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms